| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864411
Identifier: 33864411
GI number: 33864411
Start: 2263435
End: 2264229
Strand: Reverse
Name: 33864411
Synonym: PMT2147
Alternate gene names: NA
Gene position: 2264229-2263435 (Counterclockwise)
Preceding gene: 33864412
Following gene: 33864410
Centisome position: 93.92
GC content: 51.19
Gene sequence:
>795_bases ATGATTGGGACTGACATCACGACCCTGAAGCCAGTGGGTCTCTTCACTGGCTTCAGTTTGATGGCCATGATGCTTTCGAG CTCGGTTCAAGCTGCAGAGACCGCAATGGTGCAGGAGATCCTCGATGGCAATCAGTTGTACATCGATTCTCAACGGGCGA AAGTGAATCAAAAGGCTACTGAGCCACAGCAAGTCCGCACGGGCGATAGTCGTGGCCAGCTTTTGTTCAATTCCGGAGCA TCTGGTCGCCTGAATCGGTTTTCCAGAATGCAATTAGGTAGTAGTTGCTATCAACTTACCCAGGGGCAGATTTTGGTCTC CGGGAAGCAAGATGGCTGTACCCGTTCAGCCCGACTGAGTGTTCGAGGCACGAATTACGTTTTGCAGGTTTCGGACGATG GGGCTACTGAGGTGTCTGTTTTGGAGGGTGAGGTGGAATATCGTTCTGTGGAGCCTCAAGCTCAAGCTCAAGCTCAAGCT GGTCAATCTCCCAGGATGGATCAAGCTCAGGATCAACAACCTTTGAGTGATGAGCCGGTCATCATTAGATCTGGAGAATC GCTTCGGGTGACCCCTGATGGCATGATCTCAGCATTGAGAAAGCTAACGGCTGGCGATTACAGCAGCATCTTTGCAGGCC CTTTGTTTGAGGGCTTCCAGACTGAGATCCCTGCTTTGCCTTCACTCCAATCTTATGTGCGATCTCAGTTCCCATCAGTG AGAATTCCGTCAATTCCTACGATCGTGCCTTCCTCTACCCCTCGGATCCCTGGTGGTGGATTTTTTCGGTTTTGA
Upstream 100 bases:
>100_bases GACTCCTTCAGATCAAAGCTGGCGTATTGAAAGCTGAGGTTGAAAGATTTCGCGTGCCTGATTGGGGCAAAATGATTGCG CTGTTGATCAGGCTTTTGTG
Downstream 100 bases:
>100_bases TTCAATGAGCCCTGGAAGATCTGAGTGATCTTCATACTGATTGGGTGAGCAAGGTGATCCCCAGGTCAGGCACCGATGCG CATTCCTAGAAATGCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MIGTDITTLKPVGLFTGFSLMAMMLSSSVQAAETAMVQEILDGNQLYIDSQRAKVNQKATEPQQVRTGDSRGQLLFNSGA SGRLNRFSRMQLGSSCYQLTQGQILVSGKQDGCTRSARLSVRGTNYVLQVSDDGATEVSVLEGEVEYRSVEPQAQAQAQA GQSPRMDQAQDQQPLSDEPVIIRSGESLRVTPDGMISALRKLTAGDYSSIFAGPLFEGFQTEIPALPSLQSYVRSQFPSV RIPSIPTIVPSSTPRIPGGGFFRF
Sequences:
>Translated_264_residues MIGTDITTLKPVGLFTGFSLMAMMLSSSVQAAETAMVQEILDGNQLYIDSQRAKVNQKATEPQQVRTGDSRGQLLFNSGA SGRLNRFSRMQLGSSCYQLTQGQILVSGKQDGCTRSARLSVRGTNYVLQVSDDGATEVSVLEGEVEYRSVEPQAQAQAQA GQSPRMDQAQDQQPLSDEPVIIRSGESLRVTPDGMISALRKLTAGDYSSIFAGPLFEGFQTEIPALPSLQSYVRSQFPSV RIPSIPTIVPSSTPRIPGGGFFRF >Mature_264_residues MIGTDITTLKPVGLFTGFSLMAMMLSSSVQAAETAMVQEILDGNQLYIDSQRAKVNQKATEPQQVRTGDSRGQLLFNSGA SGRLNRFSRMQLGSSCYQLTQGQILVSGKQDGCTRSARLSVRGTNYVLQVSDDGATEVSVLEGEVEYRSVEPQAQAQAQA GQSPRMDQAQDQQPLSDEPVIIRSGESLRVTPDGMISALRKLTAGDYSSIFAGPLFEGFQTEIPALPSLQSYVRSQFPSV RIPSIPTIVPSSTPRIPGGGFFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28535; Mature: 28535
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGTDITTLKPVGLFTGFSLMAMMLSSSVQAAETAMVQEILDGNQLYIDSQRAKVNQKAT CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCC EPQQVRTGDSRGQLLFNSGASGRLNRFSRMQLGSSCYQLTQGQILVSGKQDGCTRSARLS CCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE VRGTNYVLQVSDDGATEVSVLEGEVEYRSVEPQAQAQAQAGQSPRMDQAQDQQPLSDEPV EECCEEEEEECCCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCE IIRSGESLRVTPDGMISALRKLTAGDYSSIFAGPLFEGFQTEIPALPSLQSYVRSQFPSV EEECCCEEEECCHHHHHHHHHHHCCCHHHHHHCHHHHCHHCCCCCCCCHHHHHHHHCCCC RIPSIPTIVPSSTPRIPGGGFFRF CCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIGTDITTLKPVGLFTGFSLMAMMLSSSVQAAETAMVQEILDGNQLYIDSQRAKVNQKAT CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCC EPQQVRTGDSRGQLLFNSGASGRLNRFSRMQLGSSCYQLTQGQILVSGKQDGCTRSARLS CCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE VRGTNYVLQVSDDGATEVSVLEGEVEYRSVEPQAQAQAQAGQSPRMDQAQDQQPLSDEPV EECCEEEEEECCCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCE IIRSGESLRVTPDGMISALRKLTAGDYSSIFAGPLFEGFQTEIPALPSLQSYVRSQFPSV EEECCCEEEECCHHHHHHHHHHHCCCHHHHHHCHHHHCHHCCCCCCCCHHHHHHHHCCCC RIPSIPTIVPSSTPRIPGGGFFRF CCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA