| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864402
Identifier: 33864402
GI number: 33864402
Start: 2248156
End: 2250153
Strand: Direct
Name: 33864402
Synonym: PMT2138
Alternate gene names: NA
Gene position: 2248156-2250153 (Clockwise)
Preceding gene: 33864401
Following gene: 33864404
Centisome position: 93.25
GC content: 44.39
Gene sequence:
>1998_bases ATGTACACACCAAAAACATTGCCAAACTTCTCACGCAAAGGGTTTCATAGGCTCTTAGCGATAGGAATAGCATCCATAGG AACTACCACAGGATTAGTCTTACCAATAGAGCCAGCAAATGCACATCAGAAAGCCACGCATCCTGAAATACAGCATGTAA GCCACCTAGACAGTGAAGCTCCACTAATCTCGATTCGTCTGCCAAAATCAGGTTCTCAGAAGAGATTTGAAGGTAGAATC ACATTTGACAACAATACCAAGTATGACGTTACACTCACCTTAGCCAGAGCGATTCGTCTTACAAATACACCCTTACCACA GAAAATAAGGCTTACAGCTGGTACAAAAAAATCCATTACCATTAATGGGTCGATTCAGGCGAGAAATGGGTTTTCAGCCG TAGGTGTTGTTTATTCAAGCTCTATGGGTGGTGTTTCGACTGGGCTAGTCAACATTGAAGTTAAGAATGGTCAATTTAGG CCTGTAAAGGCTGGTGACTTTGGCCTCGGTGATCCAGGTTCCGCCGCCATTGCAGTGCCAAGCAATACACGCATCCAAAA AGGAGTAAGGGGCTATAAGCGATTCCTTAAAGGAGGGCGCACCTTTGGTAAAGCCAGTAACGCCATCAAAGGAGGTGGTC GATCTTCTAGCCGGCCTAGCTCTCCAGGTCAATCACCAGGACTGAGGCCAGGAAGCCCCTTAAATAGACCAACAAGTGAA ACCTTGAACAATCAACGTTTGATCAATTGGATACCCAATATAGGGAATCCACAGGTCTATTTAGGAAAAGCACTGGATCA AATCCTGACAATATTTACCCCTAAAGCAGTAGCCGCAAACGCAATCTATAAGGGTCGCTTTGTCTTTCGAACAAATGATG ACAGCGATATTTATTTACCGGCCGTTGGTGTTGGGGTCAAAGCCGTTAAAGCTAATCAATCTTGCACCCATAATCCTCCA CTTGCAAGTACTACTGCAGATGGTAATGGCAATTTTGAGTTTAGGATAAATACAAATAGATCCTACAAAATTTGCTACTT CCCAAAGAACTCATTTCTCAAGATTGGCCGACAATTGGATAGTGAGTTATACATTTGGGAAAGTGCAGCCCGCAACACCA TCCCTAATGCAAGGGTCACGGAACAACCAGTAAGACACGATGGTGTCTTTGATATTTGGTATGAAGCAATGGCCTTCCAA ACCAGCATGACGGATGCTGGCATAGATCCTGCTAGAACCGGGAACAACCGAATCAGAGTTAAATTTCCATCAGAGGCGGA TGAATGCAAACCTGGGCCAGCATGGAGTTGTGCCGGCTCTAGTGGCCCAATTCGGATTGCCCCGGAGCATGCAACTAGGC ATGGCGTCATGAGCCATGAACTGGCTCATCAAGTTGATAACAAATACACCCTAGATGCAGGAATCCCGCGTCCAGCTGGT CTAGGAGGCTCTCATAGTTTCTATGGTTGTTACCCTCCAAATCTAACGACCACAGGATGGAAGCAAGGTAGGGGCATGAT TATTAGAGAAGGGTGGGCAAATTATGAAATGGCCCGAGCTCTGGGAAGCAGAGGTTCTTCTAAATATAGGAATACTTTCA GGCCAGACATTGCAAATACTTGGATTGATTCAATAAACTTTGATACTGATGGAAGAGACTGTACAGGTGTCTCAGGGTCG CACTCAGGTAAATGGGCAGATGATCTCGGATTGACAGCAGCGCAACGTGCGTATGTGTCAGGTCTTAATGGTAGCGAATC AACAGTATCAACAATTCTCTGGGATTTCTATGATACACGCAATGATAATAGTGATACTCTGCATTACGTTAGCCCTCACT ACATCACGAATATGTATCTGAAAAAACATCCGACCAATTCTGCAAAGATAGTAAACGAACGCATAATGAAAGATTGCAAG GCGAGTATCAATAAAAACGTGACCAATAATGGGCAAGTTTGTGATGATATCTTTGCTCAGAATGGAGGTACTGATTAG
Upstream 100 bases:
>100_bases TCACAGACCAGTGTGAGCAAAGCCAACAAGACGTAGCCAATCCAAGTTGACAATATTATTGAAGGATAATACATCCTTTA ACATCCAATTTTCAACTCCC
Downstream 100 bases:
>100_bases ATTTACCAATCTCTTATTATCCTTATTTTTTTTTTGGGGGGGGTGTACGCAATCTCACGACGCCCCCTAATCCATTTCCC TAAAAGCATTAAATCAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MYTPKTLPNFSRKGFHRLLAIGIASIGTTTGLVLPIEPANAHQKATHPEIQHVSHLDSEAPLISIRLPKSGSQKRFEGRI TFDNNTKYDVTLTLARAIRLTNTPLPQKIRLTAGTKKSITINGSIQARNGFSAVGVVYSSSMGGVSTGLVNIEVKNGQFR PVKAGDFGLGDPGSAAIAVPSNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPGLRPGSPLNRPTSE TLNNQRLINWIPNIGNPQVYLGKALDQILTIFTPKAVAANAIYKGRFVFRTNDDSDIYLPAVGVGVKAVKANQSCTHNPP LASTTADGNGNFEFRINTNRSYKICYFPKNSFLKIGRQLDSELYIWESAARNTIPNARVTEQPVRHDGVFDIWYEAMAFQ TSMTDAGIDPARTGNNRIRVKFPSEADECKPGPAWSCAGSSGPIRIAPEHATRHGVMSHELAHQVDNKYTLDAGIPRPAG LGGSHSFYGCYPPNLTTTGWKQGRGMIIREGWANYEMARALGSRGSSKYRNTFRPDIANTWIDSINFDTDGRDCTGVSGS HSGKWADDLGLTAAQRAYVSGLNGSESTVSTILWDFYDTRNDNSDTLHYVSPHYITNMYLKKHPTNSAKIVNERIMKDCK ASINKNVTNNGQVCDDIFAQNGGTD
Sequences:
>Translated_665_residues MYTPKTLPNFSRKGFHRLLAIGIASIGTTTGLVLPIEPANAHQKATHPEIQHVSHLDSEAPLISIRLPKSGSQKRFEGRI TFDNNTKYDVTLTLARAIRLTNTPLPQKIRLTAGTKKSITINGSIQARNGFSAVGVVYSSSMGGVSTGLVNIEVKNGQFR PVKAGDFGLGDPGSAAIAVPSNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPGLRPGSPLNRPTSE TLNNQRLINWIPNIGNPQVYLGKALDQILTIFTPKAVAANAIYKGRFVFRTNDDSDIYLPAVGVGVKAVKANQSCTHNPP LASTTADGNGNFEFRINTNRSYKICYFPKNSFLKIGRQLDSELYIWESAARNTIPNARVTEQPVRHDGVFDIWYEAMAFQ TSMTDAGIDPARTGNNRIRVKFPSEADECKPGPAWSCAGSSGPIRIAPEHATRHGVMSHELAHQVDNKYTLDAGIPRPAG LGGSHSFYGCYPPNLTTTGWKQGRGMIIREGWANYEMARALGSRGSSKYRNTFRPDIANTWIDSINFDTDGRDCTGVSGS HSGKWADDLGLTAAQRAYVSGLNGSESTVSTILWDFYDTRNDNSDTLHYVSPHYITNMYLKKHPTNSAKIVNERIMKDCK ASINKNVTNNGQVCDDIFAQNGGTD >Mature_665_residues MYTPKTLPNFSRKGFHRLLAIGIASIGTTTGLVLPIEPANAHQKATHPEIQHVSHLDSEAPLISIRLPKSGSQKRFEGRI TFDNNTKYDVTLTLARAIRLTNTPLPQKIRLTAGTKKSITINGSIQARNGFSAVGVVYSSSMGGVSTGLVNIEVKNGQFR PVKAGDFGLGDPGSAAIAVPSNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPGLRPGSPLNRPTSE TLNNQRLINWIPNIGNPQVYLGKALDQILTIFTPKAVAANAIYKGRFVFRTNDDSDIYLPAVGVGVKAVKANQSCTHNPP LASTTADGNGNFEFRINTNRSYKICYFPKNSFLKIGRQLDSELYIWESAARNTIPNARVTEQPVRHDGVFDIWYEAMAFQ TSMTDAGIDPARTGNNRIRVKFPSEADECKPGPAWSCAGSSGPIRIAPEHATRHGVMSHELAHQVDNKYTLDAGIPRPAG LGGSHSFYGCYPPNLTTTGWKQGRGMIIREGWANYEMARALGSRGSSKYRNTFRPDIANTWIDSINFDTDGRDCTGVSGS HSGKWADDLGLTAAQRAYVSGLNGSESTVSTILWDFYDTRNDNSDTLHYVSPHYITNMYLKKHPTNSAKIVNERIMKDCK ASINKNVTNNGQVCDDIFAQNGGTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72356; Mature: 72356
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTPKTLPNFSRKGFHRLLAIGIASIGTTTGLVLPIEPANAHQKATHPEIQHVSHLDSEA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC PLISIRLPKSGSQKRFEGRITFDNNTKYDVTLTLARAIRLTNTPLPQKIRLTAGTKKSIT CEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEHHHHCCCCCCCEEEEECCCCEEEE INGSIQARNGFSAVGVVYSSSMGGVSTGLVNIEVKNGQFRPVKAGDFGLGDPGSAAIAVP EECEEEECCCCEEEEEEEECCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECC SNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPGLRPGSPLNRPTSE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH TLNNQRLINWIPNIGNPQVYLGKALDQILTIFTPKAVAANAIYKGRFVFRTNDDSDIYLP HCCCCEEEHCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHCEEEECEEEEEECCCCCEEEE AVGVGVKAVKANQSCTHNPPLASTTADGNGNFEFRINTNRSYKICYFPKNSFLKIGRQLD EECCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCC SELYIWESAARNTIPNARVTEQPVRHDGVFDIWYEAMAFQTSMTDAGIDPARTGNNRIRV CEEEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE KFPSEADECKPGPAWSCAGSSGPIRIAPEHATRHGVMSHELAHQVDNKYTLDAGIPRPAG ECCCCCCCCCCCCCEEECCCCCCEEECCCHHHHCCHHHHHHHHHCCCCEEEECCCCCCCC LGGSHSFYGCYPPNLTTTGWKQGRGMIIREGWANYEMARALGSRGSSKYRNTFRPDIANT CCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCHHHH WIDSINFDTDGRDCTGVSGSHSGKWADDLGLTAAQRAYVSGLNGSESTVSTILWDFYDTR HHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCC NDNSDTLHYVSPHYITNMYLKKHPTNSAKIVNERIMKDCKASINKNVTNNGQVCDDIFAQ CCCCCEEEEECCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC NGGTD CCCCC >Mature Secondary Structure MYTPKTLPNFSRKGFHRLLAIGIASIGTTTGLVLPIEPANAHQKATHPEIQHVSHLDSEA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC PLISIRLPKSGSQKRFEGRITFDNNTKYDVTLTLARAIRLTNTPLPQKIRLTAGTKKSIT CEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEHHHHCCCCCCCEEEEECCCCEEEE INGSIQARNGFSAVGVVYSSSMGGVSTGLVNIEVKNGQFRPVKAGDFGLGDPGSAAIAVP EECEEEECCCCEEEEEEEECCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECC SNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPGLRPGSPLNRPTSE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH TLNNQRLINWIPNIGNPQVYLGKALDQILTIFTPKAVAANAIYKGRFVFRTNDDSDIYLP HCCCCEEEHCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHCEEEECEEEEEECCCCCEEEE AVGVGVKAVKANQSCTHNPPLASTTADGNGNFEFRINTNRSYKICYFPKNSFLKIGRQLD EECCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCC SELYIWESAARNTIPNARVTEQPVRHDGVFDIWYEAMAFQTSMTDAGIDPARTGNNRIRV CEEEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE KFPSEADECKPGPAWSCAGSSGPIRIAPEHATRHGVMSHELAHQVDNKYTLDAGIPRPAG ECCCCCCCCCCCCCEEECCCCCCEEECCCHHHHCCHHHHHHHHHCCCCEEEECCCCCCCC LGGSHSFYGCYPPNLTTTGWKQGRGMIIREGWANYEMARALGSRGSSKYRNTFRPDIANT CCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCHHHH WIDSINFDTDGRDCTGVSGSHSGKWADDLGLTAAQRAYVSGLNGSESTVSTILWDFYDTR HHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCC NDNSDTLHYVSPHYITNMYLKKHPTNSAKIVNERIMKDCKASINKNVTNNGQVCDDIFAQ CCCCCEEEEECCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC NGGTD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA