| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864396
Identifier: 33864396
GI number: 33864396
Start: 2243856
End: 2244113
Strand: Reverse
Name: 33864396
Synonym: PMT2132
Alternate gene names: NA
Gene position: 2244113-2243856 (Counterclockwise)
Preceding gene: 33864398
Following gene: 33864395
Centisome position: 93.08
GC content: 48.45
Gene sequence:
>258_bases ATGTCAGAAGAACAACTCAAAGCATTCATCGCCAAGGTTCAGGCCGATCCTTCACTGCAGGAACAGCTCAAGGCTGAGGG TGCTGACACTGTTGCTATTGCCAAAGCTGCAGGCTTCTCGATCACCACAGAAGACTTAAAAGAGCATCGCCAAACCCTGT CTGATGATGAGCTGGAGAGTGTAGCCGGGGGCGGGAATGATACTGTTATTACGAAAGAATACAGTTGTTATGTAACCTCG GACAAGGGCTGTTGTTAA
Upstream 100 bases:
>100_bases GGTGGCTATGGGCGTGGCTGGAGCAACAACCTTCTTCGCCCAAGTCTGACAAGGCTGCTTGGAGGAGGGACAATGAAATG AACAAAGCCCTTTCTCTCTG
Downstream 100 bases:
>100_bases ACTTTTCTACCACGCTTGCACAGGCATTAGCAGGGGCTTTGATTTCTTCAACGACTTCACTATTCGCTTAAAACGGCATC CGACAATTGCCAACCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSEEQLKAFIAKVQADPSLQEQLKAEGADTVAIAKAAGFSITTEDLKEHRQTLSDDELESVAGGGNDTVITKEYSCYVTS DKGCC
Sequences:
>Translated_85_residues MSEEQLKAFIAKVQADPSLQEQLKAEGADTVAIAKAAGFSITTEDLKEHRQTLSDDELESVAGGGNDTVITKEYSCYVTS DKGCC >Mature_84_residues SEEQLKAFIAKVQADPSLQEQLKAEGADTVAIAKAAGFSITTEDLKEHRQTLSDDELESVAGGGNDTVITKEYSCYVTSD KGCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9087; Mature: 8956
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEQLKAFIAKVQADPSLQEQLKAEGADTVAIAKAAGFSITTEDLKEHRQTLSDDELES CCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHH VAGGGNDTVITKEYSCYVTSDKGCC HCCCCCCCEEEECEEEEEECCCCCC >Mature Secondary Structure SEEQLKAFIAKVQADPSLQEQLKAEGADTVAIAKAAGFSITTEDLKEHRQTLSDDELES CHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHH VAGGGNDTVITKEYSCYVTSDKGCC HCCCCCCCEEEECEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA