| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864344
Identifier: 33864344
GI number: 33864344
Start: 2193651
End: 2194397
Strand: Direct
Name: 33864344
Synonym: PMT2080
Alternate gene names: NA
Gene position: 2193651-2194397 (Clockwise)
Preceding gene: 33864343
Following gene: 33864345
Centisome position: 90.99
GC content: 55.42
Gene sequence:
>747_bases ATGCTTGATCACGTGGACAAACCATCACCAACTGAGCAGAAGAACCGCAAGCGCCCACGCTTTTGGCTTGGACCTTTGTT GGTGGGTGGGTGTTTTGCTCTGGGCTATGGCATGACCCAGAGGATCATGATTCTGCGTGGCAACACGCAGCAGCCTCAGC AACAGTCTTTTGGACCGACTCCTTTTCCATTTCCAGGAGAGCGCCTAGAAGGACTGCGTCGTCGGCATGGTGGCAGCAGT GCAGATCTACAGGCGGATGTCGCTGCCAAGGAGGCCAAAATTTCAGCCAAACGTAAAACCAAAGAGCAGGCTGAGAAGCA GGCAAAGCAGCAAGCAGAGAAGTTGGCTGCGGCGGCTGCTCTTCGTCGTGAACAAGAACTTCAAGCGATTCGCCAAGCCA CAGAAGCCGACTCTGCAGACCCCGCTCTGGCTGCTCCAGAACTGCCTGCACCAATCAACCCTCAGAGAACAAGACCTGCT CAACCAGTAGCCCCAAAACCAAAGCCTTCCAGCACACCAGCATCAAACTCTCTTGGCAGACCAACGCCGCCTCAACCAGT AGCCCCAAAACCAAAGCCTTCCAGCACACCAGCATCAAACTCTCTTGGCAGGCCAACGCCGCCTCAGCCAGTAGCGCCAA AGCCAAAGCCTTCCAGCACACCAGCATCAGATTTCCTTCGCAGGGGAGAGTCCCCTCAACGGCCGCACTCGCCAGTATCA GACTTTCTTAGGAGGAACTATCCCTAA
Upstream 100 bases:
>100_bases AATATGGATAATTGATCAGTCTTGATCGAGTTAGCACTGATTGGCATCAGGGATTGTTTTGCCCTTGTTTGAACTTTAAA GCTGATCAAGACGACTGGAT
Downstream 100 bases:
>100_bases AAGCCCTTGAAAGTAATCACCCCATTTCCAAGCGACCCACCTCATACTTTGACAAGGCCTCCCAACGCTCCTTCAGTGCT TTGATTGCGAGTTGGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS DFLRRNYP
Sequences:
>Translated_248_residues MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS DFLRRNYP >Mature_248_residues MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS DFLRRNYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26869; Mature: 26869
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPT CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCC PFPFPGERLEGLRRRHGGSSADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAA CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPAQPVAPKPKPSSTPASNSLGR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH DFLRRNYP HHHHCCCC >Mature Secondary Structure MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPT CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCC PFPFPGERLEGLRRRHGGSSADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAA CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPAQPVAPKPKPSSTPASNSLGR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH DFLRRNYP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA