Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864344

Identifier: 33864344

GI number: 33864344

Start: 2193651

End: 2194397

Strand: Direct

Name: 33864344

Synonym: PMT2080

Alternate gene names: NA

Gene position: 2193651-2194397 (Clockwise)

Preceding gene: 33864343

Following gene: 33864345

Centisome position: 90.99

GC content: 55.42

Gene sequence:

>747_bases
ATGCTTGATCACGTGGACAAACCATCACCAACTGAGCAGAAGAACCGCAAGCGCCCACGCTTTTGGCTTGGACCTTTGTT
GGTGGGTGGGTGTTTTGCTCTGGGCTATGGCATGACCCAGAGGATCATGATTCTGCGTGGCAACACGCAGCAGCCTCAGC
AACAGTCTTTTGGACCGACTCCTTTTCCATTTCCAGGAGAGCGCCTAGAAGGACTGCGTCGTCGGCATGGTGGCAGCAGT
GCAGATCTACAGGCGGATGTCGCTGCCAAGGAGGCCAAAATTTCAGCCAAACGTAAAACCAAAGAGCAGGCTGAGAAGCA
GGCAAAGCAGCAAGCAGAGAAGTTGGCTGCGGCGGCTGCTCTTCGTCGTGAACAAGAACTTCAAGCGATTCGCCAAGCCA
CAGAAGCCGACTCTGCAGACCCCGCTCTGGCTGCTCCAGAACTGCCTGCACCAATCAACCCTCAGAGAACAAGACCTGCT
CAACCAGTAGCCCCAAAACCAAAGCCTTCCAGCACACCAGCATCAAACTCTCTTGGCAGACCAACGCCGCCTCAACCAGT
AGCCCCAAAACCAAAGCCTTCCAGCACACCAGCATCAAACTCTCTTGGCAGGCCAACGCCGCCTCAGCCAGTAGCGCCAA
AGCCAAAGCCTTCCAGCACACCAGCATCAGATTTCCTTCGCAGGGGAGAGTCCCCTCAACGGCCGCACTCGCCAGTATCA
GACTTTCTTAGGAGGAACTATCCCTAA

Upstream 100 bases:

>100_bases
AATATGGATAATTGATCAGTCTTGATCGAGTTAGCACTGATTGGCATCAGGGATTGTTTTGCCCTTGTTTGAACTTTAAA
GCTGATCAAGACGACTGGAT

Downstream 100 bases:

>100_bases
AAGCCCTTGAAAGTAATCACCCCATTTCCAAGCGACCCACCTCATACTTTGACAAGGCCTCCCAACGCTCCTTCAGTGCT
TTGATTGCGAGTTGGATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS
ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA
QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS
DFLRRNYP

Sequences:

>Translated_248_residues
MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS
ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA
QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS
DFLRRNYP
>Mature_248_residues
MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPFPFPGERLEGLRRRHGGSS
ADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPA
QPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS
DFLRRNYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26869; Mature: 26869

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPT
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCC
PFPFPGERLEGLRRRHGGSSADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAA
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPAQPVAPKPKPSSTPASNSLGR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
DFLRRNYP
HHHHCCCC
>Mature Secondary Structure
MLDHVDKPSPTEQKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPT
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCC
PFPFPGERLEGLRRRHGGSSADLQADVAAKEAKISAKRKTKEQAEKQAKQQAEKLAAAAA
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRREQELQAIRQATEADSADPALAAPELPAPINPQRTRPAQPVAPKPKPSSTPASNSLGR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPPQPVAPKPKPSSTPASNSLGRPTPPQPVAPKPKPSSTPASDFLRRGESPQRPHSPVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
DFLRRNYP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA