| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864340
Identifier: 33864340
GI number: 33864340
Start: 2184587
End: 2185069
Strand: Reverse
Name: 33864340
Synonym: PMT2076
Alternate gene names: NA
Gene position: 2185069-2184587 (Counterclockwise)
Preceding gene: 33864347
Following gene: 33864338
Centisome position: 90.63
GC content: 45.96
Gene sequence:
>483_bases TTGCCCCTACACCTGAACACATTCCAAGTCTTACCCCGGGCTATGTTCGGAGTAGTGGTGTCCGTCTGCTGTGCCGGCTT GACTCTTCCCGTAAGGGCTGAAGCTGGTTGTGCAGCCTTTGAGGCTATTGGATGGAATGAAAATTTAGCCTCTGGTGCAA AGTCAGGTTTGATCACGGGTGGCAGTTGGAGATGTTCAAATACTTACGCTGCTGGGGCTGGCTTTGTATCTGATGATTAT GCAGTTACTGTACATACTTGTTTTGATGAAATATTTTGCAGTGACAGAGGCTTTGAAGTAGGAGCCATATATGTTCAGGT CAATAAGGATGGAATGAAAGGAAATTTTAGAGCTAGGGGACAGGTGCTCAAGACAGATCGTAAGAGCATGAAGGTGAAGC AGGTGGATTCGGATGTCGCATATAGCTGGACTGATGGTGAATACAATGAGTTCAATACTGCATCACTGTTGATAGATCGC TAG
Upstream 100 bases:
>100_bases GGATGCCTGCCATATTTCTTGATTTGGGTAACGGTAACCTTCGTCCTCAGGTTTGGCTTATCTTGGTTATCGGAGCCTCT ATATGTAGCCAATACTGCTC
Downstream 100 bases:
>100_bases CATTAGAGAACTTTGTCGTTGCTAGGATGAACATTAAGCAACGACTGTAAAGAAAATACCTACACCTAATCGATGGCCTA AGGTCTTTGGCCAAATTTAT
Product: Paralytic/GBP/PSP peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPLHLNTFQVLPRAMFGVVVSVCCAGLTLPVRAEAGCAAFEAIGWNENLASGAKSGLITGGSWRCSNTYAAGAGFVSDDY AVTVHTCFDEIFCSDRGFEVGAIYVQVNKDGMKGNFRARGQVLKTDRKSMKVKQVDSDVAYSWTDGEYNEFNTASLLIDR
Sequences:
>Translated_160_residues MPLHLNTFQVLPRAMFGVVVSVCCAGLTLPVRAEAGCAAFEAIGWNENLASGAKSGLITGGSWRCSNTYAAGAGFVSDDY AVTVHTCFDEIFCSDRGFEVGAIYVQVNKDGMKGNFRARGQVLKTDRKSMKVKQVDSDVAYSWTDGEYNEFNTASLLIDR >Mature_159_residues PLHLNTFQVLPRAMFGVVVSVCCAGLTLPVRAEAGCAAFEAIGWNENLASGAKSGLITGGSWRCSNTYAAGAGFVSDDYA VTVHTCFDEIFCSDRGFEVGAIYVQVNKDGMKGNFRARGQVLKTDRKSMKVKQVDSDVAYSWTDGEYNEFNTASLLIDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17326; Mature: 17195
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHLNTFQVLPRAMFGVVVSVCCAGLTLPVRAEAGCAAFEAIGWNENLASGAKSGLITG CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCEEC GSWRCSNTYAAGAGFVSDDYAVTVHTCFDEIFCSDRGFEVGAIYVQVNKDGMKGNFRARG CCEEECCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC QVLKTDRKSMKVKQVDSDVAYSWTDGEYNEFNTASLLIDR EEEECCCHHCEEEECCCCCEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure PLHLNTFQVLPRAMFGVVVSVCCAGLTLPVRAEAGCAAFEAIGWNENLASGAKSGLITG CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCEEC GSWRCSNTYAAGAGFVSDDYAVTVHTCFDEIFCSDRGFEVGAIYVQVNKDGMKGNFRARG CCEEECCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC QVLKTDRKSMKVKQVDSDVAYSWTDGEYNEFNTASLLIDR EEEECCCHHCEEEECCCCCEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA