| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is menE [H]
Identifier: 33864322
GI number: 33864322
Start: 2165964
End: 2167199
Strand: Reverse
Name: menE [H]
Synonym: PMT2057
Alternate gene names: 33864322
Gene position: 2167199-2165964 (Counterclockwise)
Preceding gene: 33864323
Following gene: 33864321
Centisome position: 89.89
GC content: 57.2
Gene sequence:
>1236_bases ATGAGGGAGTTGGTTGCCCTGCGTTGCAATCCCGCTCAGGCTGAGCAAAGGGCCTTGCAGCTCGCTCAGGCCTTGGAGCA AGGCGATTGGGTGCAACTGCTGCCGCCTCTTGGAACTAGCGGTTTGATCCCTAGGGCTCTTTTGCCTGATGGTCCTGGTG TGGTGGTCGCAAGTGGAGGCACCTCCGGCGGACAGCAGCACTGTTTGCAGCCTTGTAGCCATCTCGACTTATCAGCTTCG GCTACAGGTCAATGGCTTCAGCAGCAGGGTTACGACCTGCAGCAATGCATGGTGCTTAATCCTTTACCGTTGCATCACGT TAGTGGCTTGATGTCTTGGTGGCGTAGTCGTTGTTGGCGTATTGGGCATACATGGCTACAGCCTGGCTTGATGAGGGATC CAGACGCTTTAGAGCAGTTGTGTGGCTCGTTGCCGGGATGGGGAGAGCAACTGGTCTTGATGTCTTTGGTGCCAACACAA CTGCAGCGGTTGTTGACGCATAACGCTGGTGTGCGTGTGTTGAAGGCTTGTGCTGTGATTTGGGTTGGTGGAGCAGTGCT TTCGCCAGGGTTGATGAAAGCGGCACGGGCCGAAGGCTTGCGCTTGGCACCCTGCTATGGAGCAACTGAGACAGCGGCGA TGGTGACAGCGCTTGCTCCTGAGGATTTCCTGGCGGGTGCGACGGGCTGTGGATCACCGCTTGAAGATGTGGAGCTGCAG TTGACGCAAGCAGGCGCGTTGCAAGTTCGAACGGCGCGGTTGGCGTTGGCGCGCTGGTTGGGTGAGGGCTTGGAGGATGT TCGCGATCAGCAAGGTTGGTGGACCTCTGGAGATGCTGGTTGCTTGATCACTGAGAGCAACCGGGTTTGGCTCAGCATTG CTGGCCGCTTGGATGGAGCGATTCACTCTGGTGGTGAAACGGTGTTCCCTGAACAGTTGGAGGCCCGTTTACAAGTGGCG GCGGTTGGTTTGCCTGTTGAGGCTGTGTTGCTGCTTGCTGTTGAAGACAGGGAATGGGGGCAACGCTTGGTGGCGCTTGT GCGTCCTGCTGCTGGGGCGAATGGAGAGGATTTGATCAAGCAACTACGCCATCTCTGTGCCGATTGGCCGCCTGCCGATC GGCCGATGCATTGGCGGCTTTGTCCAATGCTTGCTCCGATGGCGAATGGAAAATGGCAACGGGGCTATTGGCAGCAATGG TTGCGGTTGCTAGAAGCGGAAAGTACAGAGTTTTGA
Upstream 100 bases:
>100_bases AGCATCAGGGCCCTACACCAGTGGCTCCTGGCCTGGCCCCGGGTTGGTGCCCTGATGGACCTTTATTTAGCGCTGATCCC GAAGTGGTCTGGGCGGCGGC
Downstream 100 bases:
>100_bases TTATGGCCAGTCTTTCTGATGCTGAGCTTAGTAATAAGAAATTAGCCGCGGGTTTGCTAGGGATCTTTCTTGGCGCTTTA GGGATTCATAAATTTGTCTT
Product: O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)
Products: NA
Alternate protein names: o-succinylbenzoyl-CoA synthetase; OSB-CoA synthetase [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRELVALRCNPAQAEQRALQLAQALEQGDWVQLLPPLGTSGLIPRALLPDGPGVVVASGGTSGGQQHCLQPCSHLDLSAS ATGQWLQQQGYDLQQCMVLNPLPLHHVSGLMSWWRSRCWRIGHTWLQPGLMRDPDALEQLCGSLPGWGEQLVLMSLVPTQ LQRLLTHNAGVRVLKACAVIWVGGAVLSPGLMKAARAEGLRLAPCYGATETAAMVTALAPEDFLAGATGCGSPLEDVELQ LTQAGALQVRTARLALARWLGEGLEDVRDQQGWWTSGDAGCLITESNRVWLSIAGRLDGAIHSGGETVFPEQLEARLQVA AVGLPVEAVLLLAVEDREWGQRLVALVRPAAGANGEDLIKQLRHLCADWPPADRPMHWRLCPMLAPMANGKWQRGYWQQW LRLLEAESTEF
Sequences:
>Translated_411_residues MRELVALRCNPAQAEQRALQLAQALEQGDWVQLLPPLGTSGLIPRALLPDGPGVVVASGGTSGGQQHCLQPCSHLDLSAS ATGQWLQQQGYDLQQCMVLNPLPLHHVSGLMSWWRSRCWRIGHTWLQPGLMRDPDALEQLCGSLPGWGEQLVLMSLVPTQ LQRLLTHNAGVRVLKACAVIWVGGAVLSPGLMKAARAEGLRLAPCYGATETAAMVTALAPEDFLAGATGCGSPLEDVELQ LTQAGALQVRTARLALARWLGEGLEDVRDQQGWWTSGDAGCLITESNRVWLSIAGRLDGAIHSGGETVFPEQLEARLQVA AVGLPVEAVLLLAVEDREWGQRLVALVRPAAGANGEDLIKQLRHLCADWPPADRPMHWRLCPMLAPMANGKWQRGYWQQW LRLLEAESTEF >Mature_411_residues MRELVALRCNPAQAEQRALQLAQALEQGDWVQLLPPLGTSGLIPRALLPDGPGVVVASGGTSGGQQHCLQPCSHLDLSAS ATGQWLQQQGYDLQQCMVLNPLPLHHVSGLMSWWRSRCWRIGHTWLQPGLMRDPDALEQLCGSLPGWGEQLVLMSLVPTQ LQRLLTHNAGVRVLKACAVIWVGGAVLSPGLMKAARAEGLRLAPCYGATETAAMVTALAPEDFLAGATGCGSPLEDVELQ LTQAGALQVRTARLALARWLGEGLEDVRDQQGWWTSGDAGCLITESNRVWLSIAGRLDGAIHSGGETVFPEQLEARLQVA AVGLPVEAVLLLAVEDREWGQRLVALVRPAAGANGEDLIKQLRHLCADWPPADRPMHWRLCPMLAPMANGKWQRGYWQQW LRLLEAESTEF
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=249, Percent_Identity=34.5381526104418, Blast_Score=96, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17558820, Length=327, Percent_Identity=25.3822629969419, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 44656; Mature: 44656
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELVALRCNPAQAEQRALQLAQALEQGDWVQLLPPLGTSGLIPRALLPDGPGVVVASGG CCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCEEEECCC TSGGQQHCLQPCSHLDLSASATGQWLQQQGYDLQQCMVLNPLPLHHVSGLMSWWRSRCWR CCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH IGHTWLQPGLMRDPDALEQLCGSLPGWGEQLVLMSLVPTQLQRLLTHNAGVRVLKACAVI HHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WVGGAVLSPGLMKAARAEGLRLAPCYGATETAAMVTALAPEDFLAGATGCGSPLEDVELQ HHCHHHHCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHEE LTQAGALQVRTARLALARWLGEGLEDVRDQQGWWTSGDAGCLITESNRVWLSIAGRLDGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEECCCCCH IHSGGETVFPEQLEARLQVAAVGLPVEAVLLLAVEDREWGQRLVALVRPAAGANGEDLIK HCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHH QLRHLCADWPPADRPMHWRLCPMLAPMANGKWQRGYWQQWLRLLEAESTEF HHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRELVALRCNPAQAEQRALQLAQALEQGDWVQLLPPLGTSGLIPRALLPDGPGVVVASGG CCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCEEEECCC TSGGQQHCLQPCSHLDLSASATGQWLQQQGYDLQQCMVLNPLPLHHVSGLMSWWRSRCWR CCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH IGHTWLQPGLMRDPDALEQLCGSLPGWGEQLVLMSLVPTQLQRLLTHNAGVRVLKACAVI HHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WVGGAVLSPGLMKAARAEGLRLAPCYGATETAAMVTALAPEDFLAGATGCGSPLEDVELQ HHCHHHHCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHEE LTQAGALQVRTARLALARWLGEGLEDVRDQQGWWTSGDAGCLITESNRVWLSIAGRLDGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEECCCCCH IHSGGETVFPEQLEARLQVAAVGLPVEAVLLLAVEDREWGQRLVALVRPAAGANGEDLIK HCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHH QLRHLCADWPPADRPMHWRLCPMLAPMANGKWQRGYWQQWLRLLEAESTEF HHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 8206837 [H]