| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ppnK
Identifier: 33864281
GI number: 33864281
Start: 2130182
End: 2131129
Strand: Reverse
Name: ppnK
Synonym: PMT2016
Alternate gene names: 33864281
Gene position: 2131129-2130182 (Counterclockwise)
Preceding gene: 33864282
Following gene: 33864280
Centisome position: 88.4
GC content: 54.75
Gene sequence:
>948_bases ATGCGTCTCGATTTGGTCTGGGTGATCTATCGGGCGGGAAGTCATTCTGCGCATCGTGAAGCCTGTTGTTGTGTTGACGA GCTCCAAGCGCTTGGAGTGAAAGTGGTGATGGCCATGAGTGGAGTGACGGCCAACCCTTTCCCCGATTTATTGGCCTCAG AAGCCGGCCTGCCTGATTTGGCTGTTGTGCTTGGGGGCGATGGCACGGTGCTCGGTGCGGCCCGTCATCTTGCCGTTCAT GATGTACCAATCCTTAGTTTCAACGTCGGAGGGCATCTAGGTTTTCTGACGCATGAACGCTGTTTGCTTGATGGCGGTCA GCTATGGCAGCGATTGTTGCAGGACAACTTTGCTTTGGAGCGCAGGATGATGTTGCAGGCTGCCGTGGACAGCCGCTCCC CTGCTGAACGAACTGCTCGACCTACTGCTTCGCTCCAGGATTTGAATGGGACTAAGGCACTGCATTGGGCCCTGAATGAT TTTTATATGCGTCCTTATCGCGATGATGTGTCGCCTACCTGCACCCTTGAACTAGAGATCGATGGTGAGGTGGTGGATCA TTACCGTGGCGATGGTTTGATCTTGGCGACACCCACAGGGTCTACCGGCTACTCGATGGCGTCTGGAGGACCGATTCTTC ACCCTGGCATTGATGCCATCATCGTGAGTCCAATTTGTCCGATGAGTCTCTCTAGTCGTCCCGTCATCGTGCCTCCAGCT TCACGGCTCGTGATTGGGCTTCTGGGAGAAAACACTCGCCGGGTGAAGCTCTGGAAAGATGGGGCGAGTGGTGCCCTGCT TGAACCAGGCCAGTGTTGTGTTGTTCAGAGGGCTCGGCACCATGCATTGATGGTGGTTCTTGAACAGAGCCCCTCTTATT ACAGAACTCTCACGCACAAGCTGCATTGGGCGGGAAGTCTGCTCAACAATCAACCATCTCCCAGCTGA
Upstream 100 bases:
>100_bases GGCAGCTGTGGGTCTTGCGATCCTCCTTTCCTTGTATCGCAATCGCGTCACTGTGGATATGGAGCGCTTCAATCTGCTGC GCTGGTAAGGAGACCCAGGC
Downstream 100 bases:
>100_bases AGCTCATGGGCCTCGAGATCGAACGGAGGTTTTTGGTGGTGGGAGAAGAGTGGCGAGCTTTAGCAGGACCCGCCTTGCCT TTGCGTCAGGGTTACCTGGC
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase 2
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRLDLVWVIYRAGSHSAHREACCCVDELQALGVKVVMAMSGVTANPFPDLLASEAGLPDLAVVLGGDGTVLGAARHLAVH DVPILSFNVGGHLGFLTHERCLLDGGQLWQRLLQDNFALERRMMLQAAVDSRSPAERTARPTASLQDLNGTKALHWALND FYMRPYRDDVSPTCTLELEIDGEVVDHYRGDGLILATPTGSTGYSMASGGPILHPGIDAIIVSPICPMSLSSRPVIVPPA SRLVIGLLGENTRRVKLWKDGASGALLEPGQCCVVQRARHHALMVVLEQSPSYYRTLTHKLHWAGSLLNNQPSPS
Sequences:
>Translated_315_residues MRLDLVWVIYRAGSHSAHREACCCVDELQALGVKVVMAMSGVTANPFPDLLASEAGLPDLAVVLGGDGTVLGAARHLAVH DVPILSFNVGGHLGFLTHERCLLDGGQLWQRLLQDNFALERRMMLQAAVDSRSPAERTARPTASLQDLNGTKALHWALND FYMRPYRDDVSPTCTLELEIDGEVVDHYRGDGLILATPTGSTGYSMASGGPILHPGIDAIIVSPICPMSLSSRPVIVPPA SRLVIGLLGENTRRVKLWKDGASGALLEPGQCCVVQRARHHALMVVLEQSPSYYRTLTHKLHWAGSLLNNQPSPS >Mature_315_residues MRLDLVWVIYRAGSHSAHREACCCVDELQALGVKVVMAMSGVTANPFPDLLASEAGLPDLAVVLGGDGTVLGAARHLAVH DVPILSFNVGGHLGFLTHERCLLDGGQLWQRLLQDNFALERRMMLQAAVDSRSPAERTARPTASLQDLNGTKALHWALND FYMRPYRDDVSPTCTLELEIDGEVVDHYRGDGLILATPTGSTGYSMASGGPILHPGIDAIIVSPICPMSLSSRPVIVPPA SRLVIGLLGENTRRVKLWKDGASGALLEPGQCCVVQRARHHALMVVLEQSPSYYRTLTHKLHWAGSLLNNQPSPS
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=256, Percent_Identity=29.6875, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1788968, Length=261, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320794, Length=260, Percent_Identity=30, Blast_Score=108, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6322509, Length=263, Percent_Identity=30.0380228136882, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6325068, Length=225, Percent_Identity=34.2222222222222, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI28573828, Length=249, Percent_Identity=32.9317269076305, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI28573830, Length=249, Percent_Identity=32.9317269076305, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI161077047, Length=249, Percent_Identity=32.9317269076305, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI28573832, Length=249, Percent_Identity=32.9317269076305, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI28573826, Length=249, Percent_Identity=32.9317269076305, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI20129957, Length=283, Percent_Identity=28.9752650176678, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281363321, Length=279, Percent_Identity=28.673835125448, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653424, Length=279, Percent_Identity=28.673835125448, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363323, Length=279, Percent_Identity=28.673835125448, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653422, Length=283, Percent_Identity=28.9752650176678, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK2_PROMM (Q7V4D8)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895841.1 - ProteinModelPortal: Q7V4D8 - SMR: Q7V4D8 - STRING: Q7V4D8 - GeneID: 1728997 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT2016 - NMPDR: fig|74547.1.peg.2008 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: KLHWAGS - ProtClustDB: PRK02645 - BioCyc: PMAR74547:PMT2016-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 34060; Mature: 34060
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDLVWVIYRAGSHSAHREACCCVDELQALGVKVVMAMSGVTANPFPDLLASEAGLPDL CCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCCE AVVLGGDGTVLGAARHLAVHDVPILSFNVGGHLGFLTHERCLLDGGQLWQRLLQDNFALE EEEECCCCEEEHHEHEEEEECCEEEEEECCCEEEEEECCHHHCCCHHHHHHHHHCCHHHH RRMMLQAAVDSRSPAERTARPTASLQDLNGTKALHWALNDFYMRPYRDDVSPTCTLELEI HHHHHHHHHCCCCCHHHHCCCCCCHHCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEEEE DGEVVDHYRGDGLILATPTGSTGYSMASGGPILHPGIDAIIVSPICPMSLSSRPVIVPPA CCCEEEEECCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEECCH SRLVIGLLGENTRRVKLWKDGASGALLEPGQCCVVQRARHHALMVVLEQSPSYYRTLTHK HHEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCHHHHHHHH LHWAGSLLNNQPSPS HHHHHHHHCCCCCCC >Mature Secondary Structure MRLDLVWVIYRAGSHSAHREACCCVDELQALGVKVVMAMSGVTANPFPDLLASEAGLPDL CCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCCE AVVLGGDGTVLGAARHLAVHDVPILSFNVGGHLGFLTHERCLLDGGQLWQRLLQDNFALE EEEECCCCEEEHHEHEEEEECCEEEEEECCCEEEEEECCHHHCCCHHHHHHHHHCCHHHH RRMMLQAAVDSRSPAERTARPTASLQDLNGTKALHWALNDFYMRPYRDDVSPTCTLELEI HHHHHHHHHCCCCCHHHHCCCCCCHHCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEEEE DGEVVDHYRGDGLILATPTGSTGYSMASGGPILHPGIDAIIVSPICPMSLSSRPVIVPPA CCCEEEEECCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEECCH SRLVIGLLGENTRRVKLWKDGASGALLEPGQCCVVQRARHHALMVVLEQSPSYYRTLTHK HHEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCHHHHHHHH LHWAGSLLNNQPSPS HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642