| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is yitJ [H]
Identifier: 33864278
GI number: 33864278
Start: 2128180
End: 2129073
Strand: Reverse
Name: yitJ [H]
Synonym: PMT2013
Alternate gene names: 33864278
Gene position: 2129073-2128180 (Counterclockwise)
Preceding gene: 33864280
Following gene: 33864272
Centisome position: 88.31
GC content: 53.24
Gene sequence:
>894_bases TTGAGTTCAGCCTTGCAGCGCTCCATCGAGGCCGGAGCAGTGACGATCACTGCTGAGGTCATGCCTCCTCGTGGTGCAGA TCCTGTTCATTCCTTGACGATGGCTCAAGGTTTGAAAGGTTTTGTTCATGCCATCAATGTGACTGATGGCAGCCGTGCAG TGATGCGGATGAGCAGCCTTGCTCTCTGTCGCTTGCTGTTAGATGAGGGGCTTGAACCGATTTTGCAGCTCGCTTGCCGT GATCGCAATCGGATCGCCCTTCAATCAGATTTACTTGGAGCTCATGCTCTGGGTATTCGCAACTTGCTCTGCCTTACAGG TGATCCGGTTCGGGTTGGTGATCAACCTGAGGCGAGACCTGTTCATGACTACGAGTCGGTGAAATTGCTGCATCAGGTCT CTGCCTTCAACCGTGCTGAGGACCCTGTTTCGGGATTACTCCCTGATGGAGCGACTGCTTTTTTTGCTGGGGCCGCTGCT GATCCCAATTGCCAGAGCTTGAGTGGTTTGCGTCGTCGCCTCGAACGAAAGAAGGAAGCCGGCGCTCGCTTTCTTCAGAC TCAGATGGTGATGAAACCCGCTGTGCTTGAACACTTTTGCAATGAGGTGGCCAATCCCCTTGGGTTGCCTGTGCTTGCTG GGGTGTTTTTGCTGAAATCAGCTCGTAATGCAAGCTTCATTAATAGGGTTGTGCCTGGAGCATGCATTCCTGAATCACTT GTGGTTCGGCTGGAGCAAGCATCTGATCCAATGGCTGAGGGAATCGCTATTGCTGCTGAGCAGGTCAGGAGTTACTTGTC TCTTACCCAGGGCGTCCATCTGATGGCCGTGAAAGCAGAAGAGCGCATCCCCGAGATTCTTGATCAGGCTGGAATCAGCT TGGTGCCGGTGTGA
Upstream 100 bases:
>100_bases CTGTGGCCATTTCCTCCCCATTGATTATCTCCGGTCATCTTACGCAGACTTTGGGCTAGCGATCCCTCATAGTTGGTGAG TGAGTGAAGGACATCGTGAT
Downstream 100 bases:
>100_bases GGTCTGTGCCAAGGAGTTCGGCCATGGCCTTCTGCTGAGGAGATGGTTCAACCAGGTCTTGGCGCCTTGCATCGGTGATC AGCCAATCAAGGGCTGCTTC
Product: methylenetetrahydrofolate reductase
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSSALQRSIEAGAVTITAEVMPPRGADPVHSLTMAQGLKGFVHAINVTDGSRAVMRMSSLALCRLLLDEGLEPILQLACR DRNRIALQSDLLGAHALGIRNLLCLTGDPVRVGDQPEARPVHDYESVKLLHQVSAFNRAEDPVSGLLPDGATAFFAGAAA DPNCQSLSGLRRRLERKKEAGARFLQTQMVMKPAVLEHFCNEVANPLGLPVLAGVFLLKSARNASFINRVVPGACIPESL VVRLEQASDPMAEGIAIAAEQVRSYLSLTQGVHLMAVKAEERIPEILDQAGISLVPV
Sequences:
>Translated_297_residues MSSALQRSIEAGAVTITAEVMPPRGADPVHSLTMAQGLKGFVHAINVTDGSRAVMRMSSLALCRLLLDEGLEPILQLACR DRNRIALQSDLLGAHALGIRNLLCLTGDPVRVGDQPEARPVHDYESVKLLHQVSAFNRAEDPVSGLLPDGATAFFAGAAA DPNCQSLSGLRRRLERKKEAGARFLQTQMVMKPAVLEHFCNEVANPLGLPVLAGVFLLKSARNASFINRVVPGACIPESL VVRLEQASDPMAEGIAIAAEQVRSYLSLTQGVHLMAVKAEERIPEILDQAGISLVPV >Mature_296_residues SSALQRSIEAGAVTITAEVMPPRGADPVHSLTMAQGLKGFVHAINVTDGSRAVMRMSSLALCRLLLDEGLEPILQLACRD RNRIALQSDLLGAHALGIRNLLCLTGDPVRVGDQPEARPVHDYESVKLLHQVSAFNRAEDPVSGLLPDGATAFFAGAAAD PNCQSLSGLRRRLERKKEAGARFLQTQMVMKPAVLEHFCNEVANPLGLPVLAGVFLLKSARNASFINRVVPGACIPESLV VRLEQASDPMAEGIAIAAEQVRSYLSLTQGVHLMAVKAEERIPEILDQAGISLVPV
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 31787; Mature: 31656
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALQRSIEAGAVTITAEVMPPRGADPVHSLTMAQGLKGFVHAINVTDGSRAVMRMSSL CCHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH ALCRLLLDEGLEPILQLACRDRNRIALQSDLLGAHALGIRNLLCLTGDPVRVGDQPEARP HHHHHHHHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC VHDYESVKLLHQVSAFNRAEDPVSGLLPDGATAFFAGAAADPNCQSLSGLRRRLERKKEA CCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GARFLQTQMVMKPAVLEHFCNEVANPLGLPVLAGVFLLKSARNASFINRVVPGACIPESL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH VVRLEQASDPMAEGIAIAAEQVRSYLSLTQGVHLMAVKAEERIPEILDQAGISLVPV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCEECCC >Mature Secondary Structure SSALQRSIEAGAVTITAEVMPPRGADPVHSLTMAQGLKGFVHAINVTDGSRAVMRMSSL CHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH ALCRLLLDEGLEPILQLACRDRNRIALQSDLLGAHALGIRNLLCLTGDPVRVGDQPEARP HHHHHHHHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC VHDYESVKLLHQVSAFNRAEDPVSGLLPDGATAFFAGAAADPNCQSLSGLRRRLERKKEA CCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GARFLQTQMVMKPAVLEHFCNEVANPLGLPVLAGVFLLKSARNASFINRVVPGACIPESL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH VVRLEQASDPMAEGIAIAAEQVRSYLSLTQGVHLMAVKAEERIPEILDQAGISLVPV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]