| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is glmS [H]
Identifier: 33864218
GI number: 33864218
Start: 2063076
End: 2064980
Strand: Reverse
Name: glmS [H]
Synonym: PMT1953
Alternate gene names: 33864218
Gene position: 2064980-2063076 (Counterclockwise)
Preceding gene: 33864219
Following gene: 33864215
Centisome position: 85.65
GC content: 54.96
Gene sequence:
>1905_bases ATGTGCGGAATCGTTGCGGTTATTGGCTCTCGTGAGGCGGCCCCGTTGCTGTTAGAAGGGCTTAGGCAGCTCGAATACCG CGGTTACGACTCTGCTGGTCTTGCCACTGTTGAACTGTTAGCTGAGGATGGTTCCAGTCGGCTCACTTGTCAGCGGGCTC AAGGAAAGCTGGTAAACCTCACAGCATGTGTGGAAGAGAAGGGTGCGCCAGGGCATTGCGGTATCGGCCACACCCGTTGG GCCACCCATGGCAAACCTGAAGAGCGCAATGCTCATCCCCATAGGGATGGCTCTGGTCTTGTGGCGGTAGTGCAGAACGG CATTATCGAGAATCACCGTTCTCTCCGCGAGGCACTTGAGGCTGAAGGGGTGAGGTTTGTTTCAGAGACAGATACGGAAG TCATTCCTCATCTCATCTCGCTTGAACTTCGTGCTCTGCAGGTTCAGGACCGTGTCGTGAATGGAAGGATGTTGTTAGAA GCTGTGCAACGGGTGTTGCCCCAGTTGAAGGGTGCCTATGCCCTGGCAGTGGTTTGGGCGGAAGTACCAGGTGCTCTTGT CGTTGCACGCAAGCAGGCGCCGCTGTTGATTGGTCTTGGCGAAGGTGAATTCCTCTGCGCAAGTGATACGCCAGCTTTGG CAGGCTTCACGCGCACGATTCTTCCTATGGAGGATGGTGAGGTGGCCTTGCTCACGCCTTTGGGGATTGAGCTTTACAAC GCACAAGGTGAACGGCAGCAGCGAAGCCCTTCACTGCTCAGTGGCGGTGATCAAGTGGCCGATAAACGTCACTTCCGTCA TTTCATGCTCAAGGAAATCCACGAGCAGCCTGAGACTGCGGAGCTGTGGGTAGCACGTCATTTGCCTCCAGATCTCTCGT CTGATGAGCCTGTGGCTTTGCCCTTGGATCATTCCTTTTATGCCGATCTAGAGCGAATTCAGATTTTGGCCTGTGGCACG AGTCGTCATGCGGCACTTGTAGGGGCCTATTTGTTGGAGCAGTTCGCGGGGATTCCCACTTCTGTCTTTTATGCAAGTGA GTTTCGCTATGCACCGCCTCCACTAGCACCCCACACACTCACGATTGGTGTGACTCAGTCTGGGGAGACCGCAGATACTC TCGCGGCATTGACGATGGATGCTCAACGTAGGCAGGCTCATGGGGAGCCTGCATTTGCCCCTCGCCAGTTAGGGGTCACG AATCGGCCAGAAAGCTCCCTGACTCGTCAGGTTCCATACATTCTCGACATCGGCGCAGGGATTGAAGTGGGGGTGGCAGC TACAAAGACCTTCTTGGGGCAGTTGTTGGCTTTCTATGGGCTTGCACTGGCATTTGCTGCTCGTCGTCGTCAGCGCTCAT TGAGTGAGATTGCCAGCCTCAAAGACGAACTAAGGGCTTTACCGGATCAGCTGCGCTCGCTGGTAGAGCTCCATGATCAA CGCTGCGAAGTTTTAGCTAACCGCTTCGCTGATACTCAGGATGTGATCTTTTTGGGTCGTGGCATCAACTATCCCATTGC CCTTGAGGGAGCTCTCAAGCTTAAGGAGATCAGCTATATCCATGCAGAGGGCTACCCAGCTGGGGAAATGAAGCATGGAC CGATTGCTTTGCTCGATGCGCGTGTGCCGGTGGTCTCGATTGCGATGCCTGGAGTGGTTTTTGAGAAGGTGCTCAGCAAT GCCCAGGAGGCGAAAGCGCGTGATGCAAAGCTGATCGGTGTGGCGCCGGAGTGTCCGGATACGGCCTTGTTTGATGCTTT GCTTCCTGTCCCTGAGGTGAGCGAGTGGATCAGCCCCTTGCTCACGCTTGTTCCGATACAGCTACTGAGCTATCACATTG CAGCTCATAGGGGTCTTGATGTGGATCAGCCACGCAATCTCGCCAAAAGTGTGACGGTGGAATAG
Upstream 100 bases:
>100_bases GGCCTGGCTTACTGATTTGAGTTCAACGTCTCAGTTTCAGTTGTCCCTGTTTTGCGCATCTACCCCATAAGCTCAGCCCG GCAGGTGCCGGGCTTTTTTT
Downstream 100 bases:
>100_bases CTCAAGCTCAATTGACGATCACGCTTTCACTACGTCCGTAGCGGTCCTCAAAGCGCACGATGTCATCTTCACAGAGGTAT GGGCCACTTTGTACCTCAAT
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MCGIVAVIGSREAAPLLLEGLRQLEYRGYDSAGLATVELLAEDGSSRLTCQRAQGKLVNLTACVEEKGAPGHCGIGHTRW ATHGKPEERNAHPHRDGSGLVAVVQNGIIENHRSLREALEAEGVRFVSETDTEVIPHLISLELRALQVQDRVVNGRMLLE AVQRVLPQLKGAYALAVVWAEVPGALVVARKQAPLLIGLGEGEFLCASDTPALAGFTRTILPMEDGEVALLTPLGIELYN AQGERQQRSPSLLSGGDQVADKRHFRHFMLKEIHEQPETAELWVARHLPPDLSSDEPVALPLDHSFYADLERIQILACGT SRHAALVGAYLLEQFAGIPTSVFYASEFRYAPPPLAPHTLTIGVTQSGETADTLAALTMDAQRRQAHGEPAFAPRQLGVT NRPESSLTRQVPYILDIGAGIEVGVAATKTFLGQLLAFYGLALAFAARRRQRSLSEIASLKDELRALPDQLRSLVELHDQ RCEVLANRFADTQDVIFLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDARVPVVSIAMPGVVFEKVLSN AQEAKARDAKLIGVAPECPDTALFDALLPVPEVSEWISPLLTLVPIQLLSYHIAAHRGLDVDQPRNLAKSVTVE
Sequences:
>Translated_634_residues MCGIVAVIGSREAAPLLLEGLRQLEYRGYDSAGLATVELLAEDGSSRLTCQRAQGKLVNLTACVEEKGAPGHCGIGHTRW ATHGKPEERNAHPHRDGSGLVAVVQNGIIENHRSLREALEAEGVRFVSETDTEVIPHLISLELRALQVQDRVVNGRMLLE AVQRVLPQLKGAYALAVVWAEVPGALVVARKQAPLLIGLGEGEFLCASDTPALAGFTRTILPMEDGEVALLTPLGIELYN AQGERQQRSPSLLSGGDQVADKRHFRHFMLKEIHEQPETAELWVARHLPPDLSSDEPVALPLDHSFYADLERIQILACGT SRHAALVGAYLLEQFAGIPTSVFYASEFRYAPPPLAPHTLTIGVTQSGETADTLAALTMDAQRRQAHGEPAFAPRQLGVT NRPESSLTRQVPYILDIGAGIEVGVAATKTFLGQLLAFYGLALAFAARRRQRSLSEIASLKDELRALPDQLRSLVELHDQ RCEVLANRFADTQDVIFLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDARVPVVSIAMPGVVFEKVLSN AQEAKARDAKLIGVAPECPDTALFDALLPVPEVSEWISPLLTLVPIQLLSYHIAAHRGLDVDQPRNLAKSVTVE >Mature_634_residues MCGIVAVIGSREAAPLLLEGLRQLEYRGYDSAGLATVELLAEDGSSRLTCQRAQGKLVNLTACVEEKGAPGHCGIGHTRW ATHGKPEERNAHPHRDGSGLVAVVQNGIIENHRSLREALEAEGVRFVSETDTEVIPHLISLELRALQVQDRVVNGRMLLE AVQRVLPQLKGAYALAVVWAEVPGALVVARKQAPLLIGLGEGEFLCASDTPALAGFTRTILPMEDGEVALLTPLGIELYN AQGERQQRSPSLLSGGDQVADKRHFRHFMLKEIHEQPETAELWVARHLPPDLSSDEPVALPLDHSFYADLERIQILACGT SRHAALVGAYLLEQFAGIPTSVFYASEFRYAPPPLAPHTLTIGVTQSGETADTLAALTMDAQRRQAHGEPAFAPRQLGVT NRPESSLTRQVPYILDIGAGIEVGVAATKTFLGQLLAFYGLALAFAARRRQRSLSEIASLKDELRALPDQLRSLVELHDQ RCEVLANRFADTQDVIFLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDARVPVVSIAMPGVVFEKVLSN AQEAKARDAKLIGVAPECPDTALFDALLPVPEVSEWISPLLTLVPIQLLSYHIAAHRGLDVDQPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=700, Percent_Identity=32.5714285714286, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI205277386, Length=703, Percent_Identity=32.7169274537696, Blast_Score=320, Evalue=3e-87, Organism=Escherichia coli, GI1790167, Length=643, Percent_Identity=45.2566096423017, Blast_Score=477, Evalue=1e-135, Organism=Escherichia coli, GI87082251, Length=324, Percent_Identity=24.0740740740741, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788651, Length=257, Percent_Identity=26.0700389105058, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17532899, Length=452, Percent_Identity=34.5132743362832, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17532897, Length=452, Percent_Identity=34.5132743362832, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17539970, Length=445, Percent_Identity=35.5056179775281, Blast_Score=233, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322745, Length=447, Percent_Identity=32.2147651006711, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6323731, Length=443, Percent_Identity=25.9593679458239, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6323730, Length=215, Percent_Identity=35.8139534883721, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI21357745, Length=708, Percent_Identity=34.180790960452, Blast_Score=339, Evalue=4e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 68783; Mature: 68783
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVAVIGSREAAPLLLEGLRQLEYRGYDSAGLATVELLAEDGSSRLTCQRAQGKLVNL CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCEEEECCCCCEEEE TACVEEKGAPGHCGIGHTRWATHGKPEERNAHPHRDGSGLVAVVQNGIIENHRSLREALE EEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH AEGVRFVSETDTEVIPHLISLELRALQVQDRVVNGRMLLEAVQRVLPQLKGAYALAVVWA HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH EVPGALVVARKQAPLLIGLGEGEFLCASDTPALAGFTRTILPMEDGEVALLTPLGIELYN HCCCEEEEEECCCCEEEECCCCCEEECCCCCCHHCHHEEEEECCCCCEEEEECCCEEEEC AQGERQQRSPSLLSGGDQVADKRHFRHFMLKEIHEQPETAELWVARHLPPDLSSDEPVAL CCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCCCCEEE PLDHSFYADLERIQILACGTSRHAALVGAYLLEQFAGIPTSVFYASEFRYAPPPLAPHTL ECCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEE TIGVTQSGETADTLAALTMDAQRRQAHGEPAFAPRQLGVTNRPESSLTRQVPYILDIGAG EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCC IEVGVAATKTFLGQLLAFYGLALAFAARRRQRSLSEIASLKDELRALPDQLRSLVELHDQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCEVLANRFADTQDVIFLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDA HHHHHHHHCCCCCCEEEEECCCCCCEEECCCEEEEHEEEEECCCCCCCCCCCCCEEEEEC RVPVVSIAMPGVVFEKVLSNAQEAKARDAKLIGVAPECPDTALFDALLPVPEVSEWISPL CCCEEEEECCHHHHHHHHCCHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHH LTLVPIQLLSYHIAAHRGLDVDQPRNLAKSVTVE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MCGIVAVIGSREAAPLLLEGLRQLEYRGYDSAGLATVELLAEDGSSRLTCQRAQGKLVNL CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCEEEECCCCCEEEE TACVEEKGAPGHCGIGHTRWATHGKPEERNAHPHRDGSGLVAVVQNGIIENHRSLREALE EEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH AEGVRFVSETDTEVIPHLISLELRALQVQDRVVNGRMLLEAVQRVLPQLKGAYALAVVWA HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH EVPGALVVARKQAPLLIGLGEGEFLCASDTPALAGFTRTILPMEDGEVALLTPLGIELYN HCCCEEEEEECCCCEEEECCCCCEEECCCCCCHHCHHEEEEECCCCCEEEEECCCEEEEC AQGERQQRSPSLLSGGDQVADKRHFRHFMLKEIHEQPETAELWVARHLPPDLSSDEPVAL CCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCCCCEEE PLDHSFYADLERIQILACGTSRHAALVGAYLLEQFAGIPTSVFYASEFRYAPPPLAPHTL ECCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEE TIGVTQSGETADTLAALTMDAQRRQAHGEPAFAPRQLGVTNRPESSLTRQVPYILDIGAG EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCC IEVGVAATKTFLGQLLAFYGLALAFAARRRQRSLSEIASLKDELRALPDQLRSLVELHDQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCEVLANRFADTQDVIFLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALLDA HHHHHHHHCCCCCCEEEEECCCCCCEEECCCEEEEHEEEEECCCCCCCCCCCCCEEEEEC RVPVVSIAMPGVVFEKVLSNAQEAKARDAKLIGVAPECPDTALFDALLPVPEVSEWISPL CCCEEEEECCHHHHHHHHCCHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHH LTLVPIQLLSYHIAAHRGLDVDQPRNLAKSVTVE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]