| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is manC [H]
Identifier: 33864217
GI number: 33864217
Start: 2061614
End: 2063068
Strand: Direct
Name: manC [H]
Synonym: PMT1952
Alternate gene names: 33864217
Gene position: 2061614-2063068 (Clockwise)
Preceding gene: 33864216
Following gene: 33864220
Centisome position: 85.51
GC content: 54.91
Gene sequence:
>1455_bases GTGGCGACCCCCCCCCTGATTCCAGTAATCCTCTGTGGGGGAACAGGTACCCGCCTTTGGCCGCTGTCGCGCGCGAGCTA CCCCAAGCAGTACTGGGCTCTAAGCGGCTCCAGTGAAGAAACGCTGCTTCAGCAAACACAACAAAGACTGAAAGGCATCG AGGGGCTTAGTGCGCCACTGCTGATCTGCAACGAAGAGCATCGCTTCATCGTGGCCGAGCAGATGCGCCAAATCGATGTG GAGCCCAATGCAATCCTGCTCGAGCCCATGGGTCGCAATACCGCTCCAGCAGTAACAGTGGCGGCACTGCAAGCCACAGA ACGAGGCGAAGATCCGATCCTGCTAGTTCTGGCTGCAGACCATGTCATACGCAATGCAACCCAGTTCCGTCATATCATCG AAGCCGGGCGCATCCCCGCAGAAGCCGGGCGACTTGTGACCTTCGGCATCGTGCCCACCGCCCCTGAAACAGGTTACGGA TATATCGAAGCAGCAGAATCATTCGGCAACGGTGAACCCAAAGCCGTACCCATTGCCAGGTTTGTGGAAAAACCTGATCG CATCGCCGCAGAGCAGTTCCTCGCAAATGGATGCTTCACCTGGAACAGTGGCATGTTTATGTTCAAAGCGAGCGCCATCC TGAGCGAGCTGGAGCGACTATCTCCCGAGGTGGTGAGCTGTTGCCGTGCTGCCCTGGAGCAGGAAGTGCCAGACCTCGAC TTCTTGCGGCTGGAACGTGAAGCCTTCGCCAAATGTCCAAACGTTGCTATCGATGTCGCCGTCATGGAAAAAACTGAGCT GGGCACGGTGCTGCCTCTCGATGCTGGCTGGAGTGACGTGGGCAGCTGGAGTGCCCTATGGAACACCACTGATCGAGATC TGAACGGCAACGTTCTACGAGGTCATGTCATCGCTGAAAGCAGTCGAAATTGTTACCTACGTAGCGAACATCGCCTGGTG GTAGGCCTAGGAGTAGAAGACCTTGTTGTGGTTGAAACGGACGACGCAGTACTGATTGCCAACCGTAATCAAGCCCAGGA CGTAAAAACGATTGTGAAGCAATTGGAGGCGGATGGAAGCCCGGAAGGCAAAGCTCACCGCAAGATCTATCGACCCTGGG GGCATTACACCTCTGTGGTGAAAGACAGTCGCTGGCAGGTCAAACATATCGAGTTAAAACCTGGTGCAAGCCTCTCACTA CAAATGCACCATCACCGTGCTGAGCACTGGATCGTGGTCAAGGGAACCGCCTTAGTCGAAAAGGACGGAGACAAGCAATT GGTAGGAGAAAACCAGAGCACCTACATCCCTTTGGGCTGCAAACACAGACTCACCAATCCAGGACGAATGCCTATGGAAT TGATTGAGGTACAAAGTGGCCCATACCTCTGTGAAGATGACATCGTGCGCTTTGAGGACCGCTACGGACGTAGTGAAAGC GTGATCGTCAATTGA
Upstream 100 bases:
>100_bases GCTGGCTCCGACTCACCCCACCTCCTGGACTGCTAGAGCTCTAAGCAATCGACAGAAGCAAGATATCTAAGCGATTCTGG GAACACTGAAGTAGCAAACC
Downstream 100 bases:
>100_bases GCTTGAGCTATTCCACCGTCACACTTTTGGCGAGATTGCGTGGCTGATCCACATCAAGACCCCTATGAGCTGCAATGTGA TAGCTCAGTAGCTGTATCGG
Product: GDP-mannose pyrophosphorylase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MATPPLIPVILCGGTGTRLWPLSRASYPKQYWALSGSSEETLLQQTQQRLKGIEGLSAPLLICNEEHRFIVAEQMRQIDV EPNAILLEPMGRNTAPAVTVAALQATERGEDPILLVLAADHVIRNATQFRHIIEAGRIPAEAGRLVTFGIVPTAPETGYG YIEAAESFGNGEPKAVPIARFVEKPDRIAAEQFLANGCFTWNSGMFMFKASAILSELERLSPEVVSCCRAALEQEVPDLD FLRLEREAFAKCPNVAIDVAVMEKTELGTVLPLDAGWSDVGSWSALWNTTDRDLNGNVLRGHVIAESSRNCYLRSEHRLV VGLGVEDLVVVETDDAVLIANRNQAQDVKTIVKQLEADGSPEGKAHRKIYRPWGHYTSVVKDSRWQVKHIELKPGASLSL QMHHHRAEHWIVVKGTALVEKDGDKQLVGENQSTYIPLGCKHRLTNPGRMPMELIEVQSGPYLCEDDIVRFEDRYGRSES VIVN
Sequences:
>Translated_484_residues MATPPLIPVILCGGTGTRLWPLSRASYPKQYWALSGSSEETLLQQTQQRLKGIEGLSAPLLICNEEHRFIVAEQMRQIDV EPNAILLEPMGRNTAPAVTVAALQATERGEDPILLVLAADHVIRNATQFRHIIEAGRIPAEAGRLVTFGIVPTAPETGYG YIEAAESFGNGEPKAVPIARFVEKPDRIAAEQFLANGCFTWNSGMFMFKASAILSELERLSPEVVSCCRAALEQEVPDLD FLRLEREAFAKCPNVAIDVAVMEKTELGTVLPLDAGWSDVGSWSALWNTTDRDLNGNVLRGHVIAESSRNCYLRSEHRLV VGLGVEDLVVVETDDAVLIANRNQAQDVKTIVKQLEADGSPEGKAHRKIYRPWGHYTSVVKDSRWQVKHIELKPGASLSL QMHHHRAEHWIVVKGTALVEKDGDKQLVGENQSTYIPLGCKHRLTNPGRMPMELIEVQSGPYLCEDDIVRFEDRYGRSES VIVN >Mature_483_residues ATPPLIPVILCGGTGTRLWPLSRASYPKQYWALSGSSEETLLQQTQQRLKGIEGLSAPLLICNEEHRFIVAEQMRQIDVE PNAILLEPMGRNTAPAVTVAALQATERGEDPILLVLAADHVIRNATQFRHIIEAGRIPAEAGRLVTFGIVPTAPETGYGY IEAAESFGNGEPKAVPIARFVEKPDRIAAEQFLANGCFTWNSGMFMFKASAILSELERLSPEVVSCCRAALEQEVPDLDF LRLEREAFAKCPNVAIDVAVMEKTELGTVLPLDAGWSDVGSWSALWNTTDRDLNGNVLRGHVIAESSRNCYLRSEHRLVV GLGVEDLVVVETDDAVLIANRNQAQDVKTIVKQLEADGSPEGKAHRKIYRPWGHYTSVVKDSRWQVKHIELKPGASLSLQ MHHHRAEHWIVVKGTALVEKDGDKQLVGENQSTYIPLGCKHRLTNPGRMPMELIEVQSGPYLCEDDIVRFEDRYGRSESV IVN
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=480, Percent_Identity=54.1666666666667, Blast_Score=517, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 53593; Mature: 53462
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPPLIPVILCGGTGTRLWPLSRASYPKQYWALSGSSEETLLQQTQQRLKGIEGLSAPL CCCCCCEEEEEECCCCCEEEECCCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCE LICNEEHRFIVAEQMRQIDVEPNAILLEPMGRNTAPAVTVAALQATERGEDPILLVLAAD EEECCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEHHHCCCCCCEEEEEECC HVIRNATQFRHIIEAGRIPAEAGRLVTFGIVPTAPETGYGYIEAAESFGNGEPKAVPIAR HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHCCCCCCCEEHHHH FVEKPDRIAAEQFLANGCFTWNSGMFMFKASAILSELERLSPEVVSCCRAALEQEVPDLD HHCCCHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH FLRLEREAFAKCPNVAIDVAVMEKTELGTVLPLDAGWSDVGSWSALWNTTDRDLNGNVLR HHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE GHVIAESSRNCYLRSEHRLVVGLGVEDLVVVETDDAVLIANRNQAQDVKTIVKQLEADGS EEEEEECCCCEEEECCCEEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC PEGKAHRKIYRPWGHYTSVVKDSRWQVKHIELKPGASLSLQMHHHRAEHWIVVKGTALVE CCCCHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECEEEEE KDGDKQLVGENQSTYIPLGCKHRLTNPGRMPMELIEVQSGPYLCEDDIVRFEDRYGRSES CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEECCCCHHHHHHHCCCCCC VIVN EEEC >Mature Secondary Structure ATPPLIPVILCGGTGTRLWPLSRASYPKQYWALSGSSEETLLQQTQQRLKGIEGLSAPL CCCCCEEEEEECCCCCEEEECCCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCE LICNEEHRFIVAEQMRQIDVEPNAILLEPMGRNTAPAVTVAALQATERGEDPILLVLAAD EEECCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEHHHCCCCCCEEEEEECC HVIRNATQFRHIIEAGRIPAEAGRLVTFGIVPTAPETGYGYIEAAESFGNGEPKAVPIAR HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHCCCCCCCEEHHHH FVEKPDRIAAEQFLANGCFTWNSGMFMFKASAILSELERLSPEVVSCCRAALEQEVPDLD HHCCCHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH FLRLEREAFAKCPNVAIDVAVMEKTELGTVLPLDAGWSDVGSWSALWNTTDRDLNGNVLR HHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE GHVIAESSRNCYLRSEHRLVVGLGVEDLVVVETDDAVLIANRNQAQDVKTIVKQLEADGS EEEEEECCCCEEEECCCEEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC PEGKAHRKIYRPWGHYTSVVKDSRWQVKHIELKPGASLSLQMHHHRAEHWIVVKGTALVE CCCCHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECEEEEE KDGDKQLVGENQSTYIPLGCKHRLTNPGRMPMELIEVQSGPYLCEDDIVRFEDRYGRSES CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEECCCCHHHHHHHCCCCCC VIVN EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]