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The map label for this gene is yfdH [C]

Identifier: 33864199

GI number: 33864199

Start: 2042628

End: 2043602

Strand: Reverse

Name: yfdH [C]

Synonym: PMT1934

Alternate gene names: 33864199

Gene position: 2043602-2042628 (Counterclockwise)

Preceding gene: 33864203

Following gene: 33864197

Centisome position: 84.77

GC content: 48.82

Gene sequence:

>975_bases
ATGGAGAGATCATCAATTTCAGAGCGTTTGCCTGGTCAGATCTGGGTAGTAGCTGCCTGTTTCAATGAAGAGGCTGTGAT
CTGCCACTTCATCGAACGAGTGCTTGCCTTGCCGGAAGTCAGTCATCTGTTGCTGGTGGATGATGGCTCACGTGACGCCA
CGGTGGCTCAGATCCGCTCATGGCAGCAGCGATTTGTTGGCTCTAAGGCTTCTACTCCAGTCACTTTGTTGGAGCTCACA
AGGAACTTTGGTAAAGAATCGGCAATGCTGGCCGGCTTGGATTATGCCCAGGACCACTGCGATGCTGTGGTGCTGATTGA
TTCAGATCTTCAGCATCCGCCAGAGTTGATTACGCAGATGGCTCAGGCTTGGCGTGGTGGTGCTGAGGTTGTTACTGCAG
TCCGTGACGATCGTGATCAGGAATCAAGGTTGAAAGTAACAACTTCCTCCTGGTTCTACAGCGTTTTCAACCGGGTAGTG
GATTCCATTCAACTGATTGATGGGGCAGGAGATTTTCGTTTACTCAGTGCACCGGTTGTGCAAGCCCTAACTCAAATGCG
TGAATTCAGTCGTTTCTCCAAAGGTTTACTTCCTTGGACCGGATATCGCAGTGTCGAGCTTAGTTACAGCAGGGTGAAAC
GAATGGGAGGTCGTAGCTCCTGGAGCCCCCTGAAGCTATGGAGCTATGCCCTTGATGGCATCTTTTCCTTCTCAGTGATT
CCTCTAAAGATTTGGAGTTTTTTGGGCCTTGTAGTTTCCTTAATTAGTTTGCTTTACGCCGCAGTGATCGTTTTGATCAC
GATTTTTAATGGAGTTGACCTTCCTGGCTATGCCTCACTGATTGTGGCGGTTCTGTTTTTGGGGGGTATTCAATTGATTG
GTATCGGTGTACTTGGCGAGTACATCGGTCGGATCTATGTGGATACTAAAGCCAGGCCACACTATTTCATTAGGGCCATT
CATGGTTCACTTTGA

Upstream 100 bases:

>100_bases
GTCTTGGTGGTGGCCCTGACGACCAGACTTAAGCGACTTAGCTTGAGCTTGCCAAATTCTTCTCGAATTCAGTAGTGCTG
TTCTACGTCCATAGTGAGTG

Downstream 100 bases:

>100_bases
GTGGAGGCACTGGCTTGTATTTTTTTGACTGCTTGCCACTCCAGTTGACGCCATGTGGAGGAGAAAAATGTACGAGATAA
AGGGAAATCTGTTAGGCCCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MERSSISERLPGQIWVVAACFNEEAVICHFIERVLALPEVSHLLLVDDGSRDATVAQIRSWQQRFVGSKASTPVTLLELT
RNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQMAQAWRGGAEVVTAVRDDRDQESRLKVTTSSWFYSVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL

Sequences:

>Translated_324_residues
MERSSISERLPGQIWVVAACFNEEAVICHFIERVLALPEVSHLLLVDDGSRDATVAQIRSWQQRFVGSKASTPVTLLELT
RNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQMAQAWRGGAEVVTAVRDDRDQESRLKVTTSSWFYSVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL
>Mature_324_residues
MERSSISERLPGQIWVVAACFNEEAVICHFIERVLALPEVSHLLLVDDGSRDATVAQIRSWQQRFVGSKASTPVTLLELT
RNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQMAQAWRGGAEVVTAVRDDRDQESRLKVTTSSWFYSVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=314, Percent_Identity=42.6751592356688, Blast_Score=254, Evalue=6e-69,
Organism=Escherichia coli, GI1788588, Length=324, Percent_Identity=30.2469135802469, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35999; Mature: 35999

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSSISERLPGQIWVVAACFNEEAVICHFIERVLALPEVSHLLLVDDGSRDATVAQIRS
CCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
WQQRFVGSKASTPVTLLELTRNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQM
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHCCCCEEEEECCCCCCCHHHHHHH
AQAWRGGAEVVTAVRDDRDQESRLKVTTSSWFYSVFNRVVDSIQLIDGAGDFRLLSAPVV
HHHHCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
QALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
HHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
YIGRIYVDTKARPHYFIRAIHGSL
HHCEEEEECCCCCHHHHHHHCCCC
>Mature Secondary Structure
MERSSISERLPGQIWVVAACFNEEAVICHFIERVLALPEVSHLLLVDDGSRDATVAQIRS
CCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
WQQRFVGSKASTPVTLLELTRNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQM
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHCCCCEEEEECCCCCCCHHHHHHH
AQAWRGGAEVVTAVRDDRDQESRLKVTTSSWFYSVFNRVVDSIQLIDGAGDFRLLSAPVV
HHHHCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
QALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
HHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
YIGRIYVDTKARPHYFIRAIHGSL
HHCEEEEECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]