Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 33864175

GI number: 33864175

Start: 2013611

End: 2015803

Strand: Direct

Name: selD [H]

Synonym: PMT1909

Alternate gene names: 33864175

Gene position: 2013611-2015803 (Clockwise)

Preceding gene: 33864174

Following gene: 33864177

Centisome position: 83.52

GC content: 57.32

Gene sequence:

>2193_bases
ATGACGGCTGATCACCTCGTTCTGGCCGGGGGGGGACATAGCCATGCCCTGATACTGCGTCGCTGGGCCATGCGTCCCCA
ACTCCGACCTGCAGGACTGATCACCCTGATCAACCGCCACAGCACCACCCTCTACTCCGGCATGGTGCCTGGTCTCATAG
CCGGTCATTACAGACACAGTGAAATCGCAATCGACCTCCGTCGCCTCACCGACCGAGCTGGCGTAGCACTCATCATTGCC
GAAATCACAGCAGTGGAAACCCACCACAATCGCCTGCTCCTCGCCAAGCGTCCCCCCATACATTTCCAACGAATTAGTTT
CGATGTGGGCGCCGAAACCTTCAACAAGGACCCTTACCTTGAACGAAGCCAGGCGGCACTGGCAATGCCAATCAAGCCTT
TGGAGCCTGCCCTGGCATGGCTTGAACAGCAAGACAGTCAGAGGTTGCTCAATGATTCCACGCCCCTGACGGTGATCGGG
GCTGGCCTGGCGGGAGTAGAAGTGGCGCTCGCCCTTCGTCAACGCTGGCCCAAGCGCCCTTTAAATCTGCAGGCGCATCA
TGGGCAACCCAGACCAGCTCTAAAACAAGCCCTCTCCAGGGCCGCAATCGTAGTAGTACCAAGCGGAACCCCTTTGAGTG
GCCCCGCCCTGCTCTGCACTGGCAGCCAAGCCCCCGCTTGGCTTGCTACCAGTGGCTTTCCCGTGGATCCCTTTGGACGT
GTTCGCACCACTAAGACACTTCAAGTCATCAACCATCCCCACTGCTTCGCCGTCGGCGACTGTGCGGTGATTGATAAGGC
CCAGCGGCCAGCCGCAGGGGTATGGGCCGTGCAAGCCGCAAAGCCCCTTGCCCAAAACCTAGAGCGACTCAGCCGTAGAC
AACCCACCCGTCCATGGCAGCCACAACAGCTTGCCTTGCAAATACTGGGAAGTCAGCTGACCTCAGGGAGGTTCACCGCC
TGGGCTTTTTGGGGCGACCTGATCATCGGGCCCCATCCCTGGCTTTGGTACTGGAAAGAAGCTATCGATCGGCGCTTCAT
GGGCAGCTTTAACGAACTCCCAAGCATGAGCGGAGTTCTCAAGCGACAGGAGAGCATGGCTTGCCGAGGTTGCGCAGCCA
AATTGGCTGAGAAGCCGTTAAACGATGCCCTAAAGCAGGCAGGCCTAGGAGCTCTTGGGCAACAACCTGAGGACGCTGCC
TTGATTGCCAGCACATCATCAGGCGACAGCTTGCTGCAAAGTGTCGATGGTTTCCCTGCACTGATCAGCGACCCCTGGCT
TAATGGTCGCTTAACCACACTGCATGCCTGCTCAGATCTTTGGGCCAGTGGTGCGCATGTGATCTCTGCACAGGCTGTCA
TCACTCTGCCCAAGGTGTCCTCTGAACTTCAACAAGAGTTGTTGGTCCAAACGCTCAAAGGAATCCAATCAACCCTCGAA
CCGCAAGGCGCCAAATTAATTGGAGGGCATACCCTCGAAGCCCGCAGCATTCCGCCCAAACCAATCAATCTTGGGATCCA
GCTCACCCTTAGCGTTAACGGCAAGGTGGCTTCTGGACGTGTGCCTTGGAGCAAAGGTAAGCTGCAATCGGGAGATGTCC
TCCTGCTCAGCCGCCCCATAGGCAGCGGAGTGATCTTTGCTGCAGCCATGGCAGGAAAAGCTCACCCAGAGGATCTCGAC
GCTGCACTTGCGCAGATGACAATCAGCCAGCACAACCTCCTGGCAGCGCTGCGCAGCCTTGAAGAAAGGCATAAAGGAAT
GCAAACCATTCATGCATGTACCGACATCACCGGCTTCGGACTACTGGGCCATCTCGGAGAAATGCTTAGTGCAAGCAATC
ACCAACGCCATAGAGCAGGGCTACAACCTCTACGTCTCATCCTCGAAGCCGCCGCCATTCCCTCCCTGCAGGGTGCTCTA
CTGCTACTCAAAGCTGGCTATTCGAGCACCCTGGCCCCAGCCAATCGCCGCAACTGGCACTTGCTCAATCCAAGCATCAA
TGGCGAAGCCGCGCCGATCGAAATCGCACTGAACGATGTAACACCAGGCAGTGAACACCACCAGGCACTGCTCGAACTCA
TGGTGGATCCACAAACCTGTGGCCCATTACTCCTGGCCTGTTCAACCAAGATCGCCTCAGAACTTCTAAGGGATGGGCCT
TGGCAACGCATCGGTCAGGTTCAGCCGATGTAG

Upstream 100 bases:

>100_bases
CGGTGCTCAAGGTGGGTGGTCGTTGAACATCTCGCCACAGGCAATACGGTCAACTGCCAACGCAATGCCAAGCCTCAACT
CCATGCTGCGCTGATAAACC

Downstream 100 bases:

>100_bases
TGGTTGCTGCTCATTCAAGTGAAGTTGGATAATGAGAGTCACCGACAGTGAAAGTCCTCAACGTGCAACGCAACACACGC
TTGTAATCAATCTGTGGGCC

Product: selenide,water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 730; Mature: 729

Protein sequence:

>730_residues
MTADHLVLAGGGHSHALILRRWAMRPQLRPAGLITLINRHSTTLYSGMVPGLIAGHYRHSEIAIDLRRLTDRAGVALIIA
EITAVETHHNRLLLAKRPPIHFQRISFDVGAETFNKDPYLERSQAALAMPIKPLEPALAWLEQQDSQRLLNDSTPLTVIG
AGLAGVEVALALRQRWPKRPLNLQAHHGQPRPALKQALSRAAIVVVPSGTPLSGPALLCTGSQAPAWLATSGFPVDPFGR
VRTTKTLQVINHPHCFAVGDCAVIDKAQRPAAGVWAVQAAKPLAQNLERLSRRQPTRPWQPQQLALQILGSQLTSGRFTA
WAFWGDLIIGPHPWLWYWKEAIDRRFMGSFNELPSMSGVLKRQESMACRGCAAKLAEKPLNDALKQAGLGALGQQPEDAA
LIASTSSGDSLLQSVDGFPALISDPWLNGRLTTLHACSDLWASGAHVISAQAVITLPKVSSELQQELLVQTLKGIQSTLE
PQGAKLIGGHTLEARSIPPKPINLGIQLTLSVNGKVASGRVPWSKGKLQSGDVLLLSRPIGSGVIFAAAMAGKAHPEDLD
AALAQMTISQHNLLAALRSLEERHKGMQTIHACTDITGFGLLGHLGEMLSASNHQRHRAGLQPLRLILEAAAIPSLQGAL
LLLKAGYSSTLAPANRRNWHLLNPSINGEAAPIEIALNDVTPGSEHHQALLELMVDPQTCGPLLLACSTKIASELLRDGP
WQRIGQVQPM

Sequences:

>Translated_730_residues
MTADHLVLAGGGHSHALILRRWAMRPQLRPAGLITLINRHSTTLYSGMVPGLIAGHYRHSEIAIDLRRLTDRAGVALIIA
EITAVETHHNRLLLAKRPPIHFQRISFDVGAETFNKDPYLERSQAALAMPIKPLEPALAWLEQQDSQRLLNDSTPLTVIG
AGLAGVEVALALRQRWPKRPLNLQAHHGQPRPALKQALSRAAIVVVPSGTPLSGPALLCTGSQAPAWLATSGFPVDPFGR
VRTTKTLQVINHPHCFAVGDCAVIDKAQRPAAGVWAVQAAKPLAQNLERLSRRQPTRPWQPQQLALQILGSQLTSGRFTA
WAFWGDLIIGPHPWLWYWKEAIDRRFMGSFNELPSMSGVLKRQESMACRGCAAKLAEKPLNDALKQAGLGALGQQPEDAA
LIASTSSGDSLLQSVDGFPALISDPWLNGRLTTLHACSDLWASGAHVISAQAVITLPKVSSELQQELLVQTLKGIQSTLE
PQGAKLIGGHTLEARSIPPKPINLGIQLTLSVNGKVASGRVPWSKGKLQSGDVLLLSRPIGSGVIFAAAMAGKAHPEDLD
AALAQMTISQHNLLAALRSLEERHKGMQTIHACTDITGFGLLGHLGEMLSASNHQRHRAGLQPLRLILEAAAIPSLQGAL
LLLKAGYSSTLAPANRRNWHLLNPSINGEAAPIEIALNDVTPGSEHHQALLELMVDPQTCGPLLLACSTKIASELLRDGP
WQRIGQVQPM
>Mature_729_residues
TADHLVLAGGGHSHALILRRWAMRPQLRPAGLITLINRHSTTLYSGMVPGLIAGHYRHSEIAIDLRRLTDRAGVALIIAE
ITAVETHHNRLLLAKRPPIHFQRISFDVGAETFNKDPYLERSQAALAMPIKPLEPALAWLEQQDSQRLLNDSTPLTVIGA
GLAGVEVALALRQRWPKRPLNLQAHHGQPRPALKQALSRAAIVVVPSGTPLSGPALLCTGSQAPAWLATSGFPVDPFGRV
RTTKTLQVINHPHCFAVGDCAVIDKAQRPAAGVWAVQAAKPLAQNLERLSRRQPTRPWQPQQLALQILGSQLTSGRFTAW
AFWGDLIIGPHPWLWYWKEAIDRRFMGSFNELPSMSGVLKRQESMACRGCAAKLAEKPLNDALKQAGLGALGQQPEDAAL
IASTSSGDSLLQSVDGFPALISDPWLNGRLTTLHACSDLWASGAHVISAQAVITLPKVSSELQQELLVQTLKGIQSTLEP
QGAKLIGGHTLEARSIPPKPINLGIQLTLSVNGKVASGRVPWSKGKLQSGDVLLLSRPIGSGVIFAAAMAGKAHPEDLDA
ALAQMTISQHNLLAALRSLEERHKGMQTIHACTDITGFGLLGHLGEMLSASNHQRHRAGLQPLRLILEAAAIPSLQGALL
LLKAGYSSTLAPANRRNWHLLNPSINGEAAPIEIALNDVTPGSEHHQALLELMVDPQTCGPLLLACSTKIASELLRDGPW
QRIGQVQPM

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788062, Length=358, Percent_Identity=27.9329608938547, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 78670; Mature: 78539

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADHLVLAGGGHSHALILRRWAMRPQLRPAGLITLINRHSTTLYSGMVPGLIAGHYRHS
CCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHCCCCCH
EIAIDLRRLTDRAGVALIIAEITAVETHHNRLLLAKRPPIHFQRISFDVGAETFNKDPYL
HHHHHHHHHHHHCCEEEEEEEHHHEEECCCEEEEECCCCCEEEEEEEECCCHHCCCCCCC
ERSQAALAMPIKPLEPALAWLEQQDSQRLLNDSTPLTVIGAGLAGVEVALALRQRWPKRP
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCC
LNLQAHHGQPRPALKQALSRAAIVVVPSGTPLSGPALLCTGSQAPAWLATSGFPVDPFGR
CCEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
VRTTKTLQVINHPHCFAVGDCAVIDKAQRPAAGVWAVQAAKPLAQNLERLSRRQPTRPWQ
CCCCCEEEEECCCCEEEECCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC
PQQLALQILGSQLTSGRFTAWAFWGDLIIGPHPWLWYWKEAIDRRFMGSFNELPSMSGVL
HHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHCCHHCCCCHHHHH
KRQESMACRGCAAKLAEKPLNDALKQAGLGALGQQPEDAALIASTSSGDSLLQSVDGFPA
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCH
LISDPWLNGRLTTLHACSDLWASGAHVISAQAVITLPKVSSELQQELLVQTLKGIQSTLE
HHCCCCCCCCEEHHHHHHHHHCCCCEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PQGAKLIGGHTLEARSIPPKPINLGIQLTLSVNGKVASGRVPWSKGKLQSGDVLLLSRPI
CCCCEEECCCEEECCCCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCCCCCEEEEECCC
GSGVIFAAAMAGKAHPEDLDAALAQMTISQHNLLAALRSLEERHKGMQTIHACTDITGFG
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLGHLGEMLSASNHQRHRAGLQPLRLILEAAAIPSLQGALLLLKAGYSSTLAPANRRNWH
HHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEE
LLNPSINGEAAPIEIALNDVTPGSEHHQALLELMVDPQTCGPLLLACSTKIASELLRDGP
EECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
WQRIGQVQPM
HHHHCCCCCC
>Mature Secondary Structure 
TADHLVLAGGGHSHALILRRWAMRPQLRPAGLITLINRHSTTLYSGMVPGLIAGHYRHS
CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHCCCCCH
EIAIDLRRLTDRAGVALIIAEITAVETHHNRLLLAKRPPIHFQRISFDVGAETFNKDPYL
HHHHHHHHHHHHCCEEEEEEEHHHEEECCCEEEEECCCCCEEEEEEEECCCHHCCCCCCC
ERSQAALAMPIKPLEPALAWLEQQDSQRLLNDSTPLTVIGAGLAGVEVALALRQRWPKRP
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCC
LNLQAHHGQPRPALKQALSRAAIVVVPSGTPLSGPALLCTGSQAPAWLATSGFPVDPFGR
CCEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
VRTTKTLQVINHPHCFAVGDCAVIDKAQRPAAGVWAVQAAKPLAQNLERLSRRQPTRPWQ
CCCCCEEEEECCCCEEEECCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC
PQQLALQILGSQLTSGRFTAWAFWGDLIIGPHPWLWYWKEAIDRRFMGSFNELPSMSGVL
HHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHCCHHCCCCHHHHH
KRQESMACRGCAAKLAEKPLNDALKQAGLGALGQQPEDAALIASTSSGDSLLQSVDGFPA
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCH
LISDPWLNGRLTTLHACSDLWASGAHVISAQAVITLPKVSSELQQELLVQTLKGIQSTLE
HHCCCCCCCCEEHHHHHHHHHCCCCEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PQGAKLIGGHTLEARSIPPKPINLGIQLTLSVNGKVASGRVPWSKGKLQSGDVLLLSRPI
CCCCEEECCCEEECCCCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCCCCCEEEEECCC
GSGVIFAAAMAGKAHPEDLDAALAQMTISQHNLLAALRSLEERHKGMQTIHACTDITGFG
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLGHLGEMLSASNHQRHRAGLQPLRLILEAAAIPSLQGALLLLKAGYSSTLAPANRRNWH
HHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEE
LLNPSINGEAAPIEIALNDVTPGSEHHQALLELMVDPQTCGPLLLACSTKIASELLRDGP
EECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
WQRIGQVQPM
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA