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The map label for this gene is psbL [H]

Identifier: 33864164

GI number: 33864164

Start: 2000252

End: 2000371

Strand: Direct

Name: psbL [H]

Synonym: PMT1898

Alternate gene names: 33864164

Gene position: 2000252-2000371 (Clockwise)

Preceding gene: 33864163

Following gene: 33864165

Centisome position: 82.97

GC content: 48.33

Gene sequence:

>120_bases
ATGGAGCAAAACCCAAACCCGAACAACCTGCCGGCAGAACTGAACCGCACTAGCCTTTACCTAGGGCTTTTGCTGGTTTT
TGTAACCGCCGTGCTATTTACCAGCTACTTCTTCAACTAA

Upstream 100 bases:

>100_bases
GCGTTGGCTCGCTGTACACGTCTTGGGTGTACCCACAGTGTTTTTTCTTGGCGCCATAACCGCCATGCAGCTCATCCGTC
GCTGATCCCACTCCCAAACC

Downstream 100 bases:

>100_bases
GGGATCTGAAGCATGAGTACGAAACTTAAAGGCCCTGACGGACGCATACCTGACCGTCTTCCTGACGGCAGTCCAGCCGT
TTCATGGGAACGCCGGTGGA

Product: photosystem II reaction center L

Products: NA

Alternate protein names: PSII-L; PSII 5 kDa protein [H]

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MEQNPNPNNLPAELNRTSLYLGLLLVFVTAVLFTSYFFN

Sequences:

>Translated_39_residues
MEQNPNPNNLPAELNRTSLYLGLLLVFVTAVLFTSYFFN
>Mature_39_residues
MEQNPNPNNLPAELNRTSLYLGLLLVFVTAVLFTSYFFN

Specific function: Required for PSII activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003372 [H]

Pfam domain/function: PF02419 PsbL [H]

EC number: NA

Molecular weight: Translated: 4462; Mature: 4462

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNPNPNNLPAELNRTSLYLGLLLVFVTAVLFTSYFFN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQNPNPNNLPAELNRTSLYLGLLLVFVTAVLFTSYFFN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA