| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is glmM [H]
Identifier: 33864138
GI number: 33864138
Start: 1977770
End: 1979233
Strand: Direct
Name: glmM [H]
Synonym: PMT1871
Alternate gene names: 33864138
Gene position: 1977770-1979233 (Clockwise)
Preceding gene: 33864136
Following gene: 33864139
Centisome position: 82.04
GC content: 58.61
Gene sequence:
>1464_bases ATGGCATCGGCCCCCCTGCCGCTGGCCGCGGCCCCCATCCACTTCGGTACCGACGGTTGGCGCGGGGTCATCGGCGTAGA TATCACAGTCGAAAGGTTGTTAACCGTTGCTGCTGCTGCTGCACAGGAGCTGGCCTATCGCGCACCCACAGAACTCAAAA GCCGCTCAGTGATCATCGGCTACGACCGCCGCTTTCTAGCTCCGGAAATGGCAGAGGCCATTGCTGCCGCCGTGCGCGGC TGTGAGCTGGAGCCCTTACTCACCGAAACGCCTGTGCCGACACCTGCCTGCAGCTGGGCAGTCGTTCAACATCAGGCCAT TGGCGCCTTAGTGGTGACAGCCAGTCACAATCCGCCGGAATGGTTAGGGCTAAAAATCAAGGGGGCCTTTGGCGGCTCAG TGGAAGACACTTTCACCGCAGCGGTGGAACAGCGACTTGCTGCCGGAGGGATCTCAGTACCCATCAATGGGATTACCAAG CGATTTGATGGGCGTGGACAGCATCTCAAAGGATTGCGAGAGAAGCTCGATTTAACGTCTCTGATCAAGGGCCTGCAGAA GATGGGGCTCAAGGTCATCATCGATCCGATGCACGGTTCAGCAGCGGGTTGCATTGCCGAGCTACTGGACCCGCACAACC AGGGCTTGGTTCAAGAAATTCGCGCCCAGCGCGACCCGTTGTTCGGCGGCAACCCGCCCGAACCCCTCGCCCCATATCTG AGCCAGCTGATCGCAGCTGTGCAGGCCTCCAGCGCTACCGGACAACCCGCCGTGGGTCTTGTGTTCGATGGCGATGGCGA CCGCATTGCAGCCATAGATGAAGCTGGCAACTTCTGCAGCACCCAGCTGCTGATGCCCCTCCTGATTGACCACCTCGCCC GAGCCAAACAACTGCCAGGCAAGGTTGTAAAAACCGTGAGTGGCTCTGACCTGATGCGTCTAGTTGCTGAGGATCTAGGC CGGGAGGTGCTGGAACTACCGGTTGGTTTCAAATACATCGCCGCTGAAATGCTCAGCGGCGATGTGCTGGTGGGAGGTGA GGAATCAGGAGGGGTGGGCTTCGGAATGCACCTACCTGAAAGGGATGCCCTCTTTGCAGCCCTGCTTGTACTGGAAGCAC TTGTGGAGGGAGGGCAGCCCCTCGGCGCACGCATGAAAGCCCTGCAAGAGCGTTGTAGGGGGAGCAGTTTTTACGAACGC TTCGATCTACGCCTTGCTGACATGGACTCGCGACAACGACTAGAAACTCTGCTTGAGCAAACCCCTCCAGCCACAGTTGC TGATCAACCCGTTCAGACCGTGATCCGTACAGATGGCGTGAAATTTCGACTTGGACCTAGCCACTGGTTGATGCTGCGTT TCTCCGGCACCGAACCCCTGCTCAGGATCTACTGCGAAGCTCCCAGCGAGACAGACGTCAAAGCAGCTCTGAACTGGGCA AAGCAGCTCGCAGAACGAACATGA
Upstream 100 bases:
>100_bases AGCAAGCGATCAGTCAGAACGTTGGCAGCGAGAGGGGTGGCACCCATCAGCCGACGTTACGGTGGCTGCCTGCTAGATCC AGTCCATTAGTTGATCATTT
Downstream 100 bases:
>100_bases GCAGCAATGAATTGACAGAGCGGGTGCTGGTGATCGCTAGCGGCAATGCTGGCAAAATTCGCGAGTTCCGTCAGTTGCTG GCTCACCTGCCGCTCAGCGT
Product: phosphotransferase superclass
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MASAPLPLAAAPIHFGTDGWRGVIGVDITVERLLTVAAAAAQELAYRAPTELKSRSVIIGYDRRFLAPEMAEAIAAAVRG CELEPLLTETPVPTPACSWAVVQHQAIGALVVTASHNPPEWLGLKIKGAFGGSVEDTFTAAVEQRLAAGGISVPINGITK RFDGRGQHLKGLREKLDLTSLIKGLQKMGLKVIIDPMHGSAAGCIAELLDPHNQGLVQEIRAQRDPLFGGNPPEPLAPYL SQLIAAVQASSATGQPAVGLVFDGDGDRIAAIDEAGNFCSTQLLMPLLIDHLARAKQLPGKVVKTVSGSDLMRLVAEDLG REVLELPVGFKYIAAEMLSGDVLVGGEESGGVGFGMHLPERDALFAALLVLEALVEGGQPLGARMKALQERCRGSSFYER FDLRLADMDSRQRLETLLEQTPPATVADQPVQTVIRTDGVKFRLGPSHWLMLRFSGTEPLLRIYCEAPSETDVKAALNWA KQLAERT
Sequences:
>Translated_487_residues MASAPLPLAAAPIHFGTDGWRGVIGVDITVERLLTVAAAAAQELAYRAPTELKSRSVIIGYDRRFLAPEMAEAIAAAVRG CELEPLLTETPVPTPACSWAVVQHQAIGALVVTASHNPPEWLGLKIKGAFGGSVEDTFTAAVEQRLAAGGISVPINGITK RFDGRGQHLKGLREKLDLTSLIKGLQKMGLKVIIDPMHGSAAGCIAELLDPHNQGLVQEIRAQRDPLFGGNPPEPLAPYL SQLIAAVQASSATGQPAVGLVFDGDGDRIAAIDEAGNFCSTQLLMPLLIDHLARAKQLPGKVVKTVSGSDLMRLVAEDLG REVLELPVGFKYIAAEMLSGDVLVGGEESGGVGFGMHLPERDALFAALLVLEALVEGGQPLGARMKALQERCRGSSFYER FDLRLADMDSRQRLETLLEQTPPATVADQPVQTVIRTDGVKFRLGPSHWLMLRFSGTEPLLRIYCEAPSETDVKAALNWA KQLAERT >Mature_486_residues ASAPLPLAAAPIHFGTDGWRGVIGVDITVERLLTVAAAAAQELAYRAPTELKSRSVIIGYDRRFLAPEMAEAIAAAVRGC ELEPLLTETPVPTPACSWAVVQHQAIGALVVTASHNPPEWLGLKIKGAFGGSVEDTFTAAVEQRLAAGGISVPINGITKR FDGRGQHLKGLREKLDLTSLIKGLQKMGLKVIIDPMHGSAAGCIAELLDPHNQGLVQEIRAQRDPLFGGNPPEPLAPYLS QLIAAVQASSATGQPAVGLVFDGDGDRIAAIDEAGNFCSTQLLMPLLIDHLARAKQLPGKVVKTVSGSDLMRLVAEDLGR EVLELPVGFKYIAAEMLSGDVLVGGEESGGVGFGMHLPERDALFAALLVLEALVEGGQPLGARMKALQERCRGSSFYERF DLRLADMDSRQRLETLLEQTPPATVADQPVQTVIRTDGVKFRLGPSHWLMLRFSGTEPLLRIYCEAPSETDVKAALNWAK QLAERT
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=465, Percent_Identity=24.7311827956989, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI21361621, Length=411, Percent_Identity=24.5742092457421, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI133922562, Length=484, Percent_Identity=24.5867768595041, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1789566, Length=477, Percent_Identity=25.5765199161426, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786904, Length=494, Percent_Identity=25.3036437246964, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17535441, Length=457, Percent_Identity=25.382932166302, Blast_Score=102, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6323752, Length=415, Percent_Identity=24.0963855421687, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI17864244, Length=408, Percent_Identity=26.4705882352941, Blast_Score=112, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52069; Mature: 51938
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAPLPLAAAPIHFGTDGWRGVIGVDITVERLLTVAAAAAQELAYRAPTELKSRSVIIG CCCCCCCCEECCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEE YDRRFLAPEMAEAIAAAVRGCELEPLLTETPVPTPACSWAVVQHQAIGALVVTASHNPPE CCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCC WLGLKIKGAFGGSVEDTFTAAVEQRLAAGGISVPINGITKRFDGRGQHLKGLREKLDLTS EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LIKGLQKMGLKVIIDPMHGSAAGCIAELLDPHNQGLVQEIRAQRDPLFGGNPPEPLAPYL HHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH SQLIAAVQASSATGQPAVGLVFDGDGDRIAAIDEAGNFCSTQLLMPLLIDHLARAKQLPG HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC KVVKTVSGSDLMRLVAEDLGREVLELPVGFKYIAAEMLSGDVLVGGEESGGVGFGMHLPE HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCEEEECCCCC RDALFAALLVLEALVEGGQPLGARMKALQERCRGSSFYERFDLRLADMDSRQRLETLLEQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEECCCHHHHHHHHHHC TPPATVADQPVQTVIRTDGVKFRLGPSHWLMLRFSGTEPLLRIYCEAPSETDVKAALNWA CCCCCCCCCHHHHHHHCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH KQLAERT HHHHHCC >Mature Secondary Structure ASAPLPLAAAPIHFGTDGWRGVIGVDITVERLLTVAAAAAQELAYRAPTELKSRSVIIG CCCCCCCEECCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEE YDRRFLAPEMAEAIAAAVRGCELEPLLTETPVPTPACSWAVVQHQAIGALVVTASHNPPE CCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCC WLGLKIKGAFGGSVEDTFTAAVEQRLAAGGISVPINGITKRFDGRGQHLKGLREKLDLTS EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LIKGLQKMGLKVIIDPMHGSAAGCIAELLDPHNQGLVQEIRAQRDPLFGGNPPEPLAPYL HHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH SQLIAAVQASSATGQPAVGLVFDGDGDRIAAIDEAGNFCSTQLLMPLLIDHLARAKQLPG HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC KVVKTVSGSDLMRLVAEDLGREVLELPVGFKYIAAEMLSGDVLVGGEESGGVGFGMHLPE HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCEEEECCCCC RDALFAALLVLEALVEGGQPLGARMKALQERCRGSSFYERFDLRLADMDSRQRLETLLEQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEECCCHHHHHHHHHHC TPPATVADQPVQTVIRTDGVKFRLGPSHWLMLRFSGTEPLLRIYCEAPSETDVKAALNWA CCCCCCCCCHHHHHHHCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH KQLAERT HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA