Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is sfsA [H]

Identifier: 33864119

GI number: 33864119

Start: 1959329

End: 1960165

Strand: Direct

Name: sfsA [H]

Synonym: PMT1852

Alternate gene names: 33864119

Gene position: 1959329-1960165 (Clockwise)

Preceding gene: 33864117

Following gene: 33864120

Centisome position: 81.27

GC content: 56.39

Gene sequence:

>837_bases
TTGGGCCTCAGACCATCTGATCATTTAGCAGCATTCTCAAGCCCTGCAAGCATCCCCATGACCAAGGCCATCCCGGAAGG
ATTGTTAGGGAGTCCACTGCTCACATTCCCACCACTCGATGAAGGAATATTGGTGAAGCGCTACAAGCGCTTCCTTGCCG
ATGTGGAGCTAGTCAGCGGCGAAATCGTGACAGCCCACTGCGCCAACACAGGCCCCATGACTGGTGTTCTTCATCCTGGA
GGCAGAGTGAGAATCCGCCATGCGCCTTCTCCCAAGCGCAAGTTGGCCTGGACATGGGAGCAAGCGGAGGCACCCAGCGC
CCAGGGCGGCCTCTGCTGGGTGGGTATCAACACAGCCTTGGCCAATAGCCTGATCAGAGCAGCGATTGAAGCCGGACACC
TCAAGCAAGTCCTCGGTCCGATCGCAGCAATCCGTGCGGAAGTGACTTATGGAAGCAACCGACGCAGCCGCATTGACCTG
TTTTTAACCCCTGATGCCAATTGCTCCGACACCAGACCCATTTACTTAGAGGTCAAGAACACCACCTGGATCGAAGACTC
CTTAGCCCTCTTTCCCGACACGGTGACAGAACGAGGGCAAAAACATCTCAAAGAGCTAATCGGTGTGCTGCCAGAGTCCA
GAGCAGTCTTGGTGCCCTGCCTCAGCCGCCACGATGTCCAAGCGTTCGCCCCAGGGGATAGCGCAGACCCTCGCTATGGC
GAACTCTTTCGTCTGGCTCTTACAGCTGGCGTGGAAGTCATTCCCTGTTGCTTCGGATTTCACCTCGACAAGATCACCTG
GGAAGGCCTTAGGCCTACCAAGACGACACAGAGTTGA

Upstream 100 bases:

>100_bases
GCAGCCGCAATTACAAGCTGACGAACCAGCCCTCCCACCTTGCTTAGCAAGGTGCCGACTGTGACAACCAGAGCAATACG
CTTTAAGGATCTCCCCATCC

Downstream 100 bases:

>100_bases
CACAGCAAAAAGAGCTCCAGATGTAACAAAATGAACTTTCACCCCCGCAAATAGACCTAAAAGCGTCCACCAATCCCATA
TTTCGTATCAACATGAACAT

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGLRPSDHLAAFSSPASIPMTKAIPEGLLGSPLLTFPPLDEGILVKRYKRFLADVELVSGEIVTAHCANTGPMTGVLHPG
GRVRIRHAPSPKRKLAWTWEQAEAPSAQGGLCWVGINTALANSLIRAAIEAGHLKQVLGPIAAIRAEVTYGSNRRSRIDL
FLTPDANCSDTRPIYLEVKNTTWIEDSLALFPDTVTERGQKHLKELIGVLPESRAVLVPCLSRHDVQAFAPGDSADPRYG
ELFRLALTAGVEVIPCCFGFHLDKITWEGLRPTKTTQS

Sequences:

>Translated_278_residues
MGLRPSDHLAAFSSPASIPMTKAIPEGLLGSPLLTFPPLDEGILVKRYKRFLADVELVSGEIVTAHCANTGPMTGVLHPG
GRVRIRHAPSPKRKLAWTWEQAEAPSAQGGLCWVGINTALANSLIRAAIEAGHLKQVLGPIAAIRAEVTYGSNRRSRIDL
FLTPDANCSDTRPIYLEVKNTTWIEDSLALFPDTVTERGQKHLKELIGVLPESRAVLVPCLSRHDVQAFAPGDSADPRYG
ELFRLALTAGVEVIPCCFGFHLDKITWEGLRPTKTTQS
>Mature_277_residues
GLRPSDHLAAFSSPASIPMTKAIPEGLLGSPLLTFPPLDEGILVKRYKRFLADVELVSGEIVTAHCANTGPMTGVLHPGG
RVRIRHAPSPKRKLAWTWEQAEAPSAQGGLCWVGINTALANSLIRAAIEAGHLKQVLGPIAAIRAEVTYGSNRRSRIDLF
LTPDANCSDTRPIYLEVKNTTWIEDSLALFPDTVTERGQKHLKELIGVLPESRAVLVPCLSRHDVQAFAPGDSADPRYGE
LFRLALTAGVEVIPCCFGFHLDKITWEGLRPTKTTQS

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=220, Percent_Identity=40, Blast_Score=147, Evalue=8e-37,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 30214; Mature: 30083

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRPSDHLAAFSSPASIPMTKAIPEGLLGSPLLTFPPLDEGILVKRYKRFLADVELVSG
CCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCC
EIVTAHCANTGPMTGVLHPGGRVRIRHAPSPKRKLAWTWEQAEAPSAQGGLCWVGINTAL
CEEEEEECCCCCCEEEECCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCEEEEECHHHH
ANSLIRAAIEAGHLKQVLGPIAAIRAEVTYGSNRRSRIDLFLTPDANCSDTRPIYLEVKN
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECC
TTWIEDSLALFPDTVTERGQKHLKELIGVLPESRAVLVPCLSRHDVQAFAPGDSADPRYG
CEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCHH
ELFRLALTAGVEVIPCCFGFHLDKITWEGLRPTKTTQS
HHHHHHHHCCCCEEHHHHCCEECCEEECCCCCCCCCCC
>Mature Secondary Structure 
GLRPSDHLAAFSSPASIPMTKAIPEGLLGSPLLTFPPLDEGILVKRYKRFLADVELVSG
CCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCC
EIVTAHCANTGPMTGVLHPGGRVRIRHAPSPKRKLAWTWEQAEAPSAQGGLCWVGINTAL
CEEEEEECCCCCCEEEECCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCEEEEECHHHH
ANSLIRAAIEAGHLKQVLGPIAAIRAEVTYGSNRRSRIDLFLTPDANCSDTRPIYLEVKN
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECC
TTWIEDSLALFPDTVTERGQKHLKELIGVLPESRAVLVPCLSRHDVQAFAPGDSADPRYG
CEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCHH
ELFRLALTAGVEVIPCCFGFHLDKITWEGLRPTKTTQS
HHHHHHHHCCCCEEHHHHCCEECCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA