| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864116
Identifier: 33864116
GI number: 33864116
Start: 1957153
End: 1957443
Strand: Direct
Name: 33864116
Synonym: PMT1849
Alternate gene names: NA
Gene position: 1957153-1957443 (Clockwise)
Preceding gene: 33864115
Following gene: 33864117
Centisome position: 81.18
GC content: 56.01
Gene sequence:
>291_bases ATGACAATCGATCCAGCAGATTTAAAAGAGCTACAACTATCCCTTGCCGATCGCATCTACCTTCAGATCGCCAGCTGGCA CCTTTATCTGGGCGATGCAGGGCTTGCAGAAAACCTTGCCATCGAATGCAGCGTCAGGCTCAATGAAGGCGCCAATGTGG CAGCCCGCCAAGCCCTGGAATCAGTGCAAGTGCCCCTAGGTGGAGGGAGCACCCGCCTACCACTGGCGCGCCTAATCCCA GCCTCTCAACTTCGTGACCTTGAGGAGATCCTGGAGCCCTACTGCCGATAA
Upstream 100 bases:
>100_bases CCTTGCATTTGTAGTCGTCAAAAGACCCAAGGCCAAGACCACCGAAGAGCAAGCCTGATCCCAACATCAAGCCAGCATCC ACCTAGCAAGACCATCACTT
Downstream 100 bases:
>100_bases GGTTGCTGCCATCCATGGAGGGCCAGTGCTGATCATCGAGGTCACCAACGCCCGTGAAGTGATGCGTCAACGCATCGGAC CACTAGGGGAGCGACTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTIDPADLKELQLSLADRIYLQIASWHLYLGDAGLAENLAIECSVRLNEGANVAARQALESVQVPLGGGSTRLPLARLIP ASQLRDLEEILEPYCR
Sequences:
>Translated_96_residues MTIDPADLKELQLSLADRIYLQIASWHLYLGDAGLAENLAIECSVRLNEGANVAARQALESVQVPLGGGSTRLPLARLIP ASQLRDLEEILEPYCR >Mature_95_residues TIDPADLKELQLSLADRIYLQIASWHLYLGDAGLAENLAIECSVRLNEGANVAARQALESVQVPLGGGSTRLPLARLIPA SQLRDLEEILEPYCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10499; Mature: 10368
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDPADLKELQLSLADRIYLQIASWHLYLGDAGLAENLAIECSVRLNEGANVAARQALE CCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHH SVQVPLGGGSTRLPLARLIPASQLRDLEEILEPYCR HHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TIDPADLKELQLSLADRIYLQIASWHLYLGDAGLAENLAIECSVRLNEGANVAARQALE CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHH SVQVPLGGGSTRLPLARLIPASQLRDLEEILEPYCR HHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA