| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is txlA [H]
Identifier: 33864093
GI number: 33864093
Start: 1935539
End: 1936105
Strand: Direct
Name: txlA [H]
Synonym: PMT1826
Alternate gene names: 33864093
Gene position: 1935539-1936105 (Clockwise)
Preceding gene: 33864091
Following gene: 33864097
Centisome position: 80.28
GC content: 52.73
Gene sequence:
>567_bases ATGACCGGAAGTTCCCCGTCTTCCACTCTCGGCCAAGGCCAAAGGTTGATCCTGCTATTCACAGCATTGGGATTAGCAGT CGTTCTTTTCCTGCTGCGGGGCGGCCTCAATGCTGAGGCACCGCTCGAACAACTGGCACGGCGCTCCCTCGACCCAGATG TCGCACTCACCAATGGTCGACCGACCGTGATCGAATTTTATGCTGATTGGTGTCAAGCCTGTCGTGAAATGGCCCCAGCC ATGCTCAAAACGGAACGTGACAGGGAAGACCAGCTCGACGTTGTGCTGGTAAACGTCGACAACCCCCGCTGGCAAGACCT TGTCGATCGCTACGACGTCAACGGCATTCCCCAGCTGAACTTCTTTGATAACAAAGGCAAACTGCAGGGTCTCTCACTGG GTGCACGCACTCAAGAACAACTACAGCAATTAACTGATGCTCTGATTCAAAACCAACCACTACCAAACTTCGCCGGTGTA GGCGCTATCAGCAACCTGAATGCATCACAAGAACGAACAGAGAAGCAAAACGATTTAGAGGCTATTAGGCCAATGAGCCA TGGCTAA
Upstream 100 bases:
>100_bases GAATGGTGAAAAGACGCTTCACTTCTGACCAGTTAGCCCATTGAAGCGAGCAACAACAACAAAACAGACCTGCCAAAGTG CATCGAGAATCTTGCCCATC
Downstream 100 bases:
>100_bases TCTAAAAGCAGTCAATAAGCAAATATCGATAACATGACGAGCCATCGCAGAAGCTCTTGAGCCATCAACTAATATAATTA TATCGACTAAATAGATCAAG
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTGSSPSSTLGQGQRLILLFTALGLAVVLFLLRGGLNAEAPLEQLARRSLDPDVALTNGRPTVIEFYADWCQACREMAPA MLKTERDREDQLDVVLVNVDNPRWQDLVDRYDVNGIPQLNFFDNKGKLQGLSLGARTQEQLQQLTDALIQNQPLPNFAGV GAISNLNASQERTEKQNDLEAIRPMSHG
Sequences:
>Translated_188_residues MTGSSPSSTLGQGQRLILLFTALGLAVVLFLLRGGLNAEAPLEQLARRSLDPDVALTNGRPTVIEFYADWCQACREMAPA MLKTERDREDQLDVVLVNVDNPRWQDLVDRYDVNGIPQLNFFDNKGKLQGLSLGARTQEQLQQLTDALIQNQPLPNFAGV GAISNLNASQERTEKQNDLEAIRPMSHG >Mature_187_residues TGSSPSSTLGQGQRLILLFTALGLAVVLFLLRGGLNAEAPLEQLARRSLDPDVALTNGRPTVIEFYADWCQACREMAPAM LKTERDREDQLDVVLVNVDNPRWQDLVDRYDVNGIPQLNFFDNKGKLQGLSLGARTQEQLQQLTDALIQNQPLPNFAGVG AISNLNASQERTEKQNDLEAIRPMSHG
Specific function: Required for disulfide bond formation in some proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 20757; Mature: 20626
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSPSSTLGQGQRLILLFTALGLAVVLFLLRGGLNAEAPLEQLARRSLDPDVALTNGR CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCC PTVIEFYADWCQACREMAPAMLKTERDREDQLDVVLVNVDNPRWQDLVDRYDVNGIPQLN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC FFDNKGKLQGLSLGARTQEQLQQLTDALIQNQPLPNFAGVGAISNLNASQERTEKQNDLE EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHH AIRPMSHG HHCCCCCC >Mature Secondary Structure TGSSPSSTLGQGQRLILLFTALGLAVVLFLLRGGLNAEAPLEQLARRSLDPDVALTNGR CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCC PTVIEFYADWCQACREMAPAMLKTERDREDQLDVVLVNVDNPRWQDLVDRYDVNGIPQLN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC FFDNKGKLQGLSLGARTQEQLQQLTDALIQNQPLPNFAGVGAISNLNASQERTEKQNDLE EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHH AIRPMSHG HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA