| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864085
Identifier: 33864085
GI number: 33864085
Start: 1926247
End: 1926858
Strand: Reverse
Name: 33864085
Synonym: PMT1818
Alternate gene names: NA
Gene position: 1926858-1926247 (Counterclockwise)
Preceding gene: 33864090
Following gene: 33864083
Centisome position: 79.92
GC content: 56.05
Gene sequence:
>612_bases GTGCCTGAACTCCCCTATCGCACTCTGGTCTGGCTGACCTACCGCCTTGCGGCAATGTTTGCACTGGGCCTGCCATTTGT TTTGTTGATCTGGGCTTCGGTGCGTCGGGAGGCTTCGATGGTGCGTTTACTGACCATCTATTGGAAGATTGCCAGTTTGC TAGCCATCAGCGTGCTGTTGCTGACCGATCAAAGGCCTATTGGTTATCTGACGACCTTTTTGGCACCCTTGTTGATGGTG GCTTCAGTTTGGTTTTGGGTAGACCTTAATGAGGAGCTTGCCGATTTACCCCCCTGGCGGCCTCTGCCATTAACGGTGCG TATTTGGCGCTGGGCTCTGAGCGGATTCGGTCTAATGGCCGCGGCTATGGCGTCAACCAGTCTTGCTTGCGTCAAGGACG TTGCAGGGGCTAATTGTCGCGTCTGGCTTGAGGCTCCGCAGGGGTTGCATCGGGTTGCGGAGCGACTGTTCGATTTCGTT TTCGGTGGACAGTGGACCGAAGCGGTCGCCGCATTTATTGGTTATGTGGCCTTGGTGGCTTATGTCGTGGGCTTGCTGCA GTGGCTCCTGGTGCGACTTCCCCGTCAGGGTCGGGTTGCTGGTGAATTCTGA
Upstream 100 bases:
>100_bases GAACCAATTGAGCGGAGAGAAGGGCTCCATGAATTGGACCCTAACAACACTGACGGAACTCAGGCCAGCATTGATAATGA CGCCTTCACGAACCTCCTAA
Downstream 100 bases:
>100_bases CCCTATTGCCTTTGATGCGATAGAGGAGCTGTGAGCAAAATCACCTCAGGTCTTGCGGCGCGTCAACACAACACAGAGAA CTTGCAGAGAAGCTATGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPELPYRTLVWLTYRLAAMFALGLPFVLLIWASVRREASMVRLLTIYWKIASLLAISVLLLTDQRPIGYLTTFLAPLLMV ASVWFWVDLNEELADLPPWRPLPLTVRIWRWALSGFGLMAAAMASTSLACVKDVAGANCRVWLEAPQGLHRVAERLFDFV FGGQWTEAVAAFIGYVALVAYVVGLLQWLLVRLPRQGRVAGEF
Sequences:
>Translated_203_residues MPELPYRTLVWLTYRLAAMFALGLPFVLLIWASVRREASMVRLLTIYWKIASLLAISVLLLTDQRPIGYLTTFLAPLLMV ASVWFWVDLNEELADLPPWRPLPLTVRIWRWALSGFGLMAAAMASTSLACVKDVAGANCRVWLEAPQGLHRVAERLFDFV FGGQWTEAVAAFIGYVALVAYVVGLLQWLLVRLPRQGRVAGEF >Mature_202_residues PELPYRTLVWLTYRLAAMFALGLPFVLLIWASVRREASMVRLLTIYWKIASLLAISVLLLTDQRPIGYLTTFLAPLLMVA SVWFWVDLNEELADLPPWRPLPLTVRIWRWALSGFGLMAAAMASTSLACVKDVAGANCRVWLEAPQGLHRVAERLFDFVF GGQWTEAVAAFIGYVALVAYVVGLLQWLLVRLPRQGRVAGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22880; Mature: 22748
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELPYRTLVWLTYRLAAMFALGLPFVLLIWASVRREASMVRLLTIYWKIASLLAISVLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDQRPIGYLTTFLAPLLMVASVWFWVDLNEELADLPPWRPLPLTVRIWRWALSGFGLMA HCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AAMASTSLACVKDVAGANCRVWLEAPQGLHRVAERLFDFVFGGQWTEAVAAFIGYVALVA HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YVVGLLQWLLVRLPRQGRVAGEF HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PELPYRTLVWLTYRLAAMFALGLPFVLLIWASVRREASMVRLLTIYWKIASLLAISVLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDQRPIGYLTTFLAPLLMVASVWFWVDLNEELADLPPWRPLPLTVRIWRWALSGFGLMA HCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AAMASTSLACVKDVAGANCRVWLEAPQGLHRVAERLFDFVFGGQWTEAVAAFIGYVALVA HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YVVGLLQWLLVRLPRQGRVAGEF HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA