| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864079
Identifier: 33864079
GI number: 33864079
Start: 1916897
End: 1917244
Strand: Direct
Name: 33864079
Synonym: PMT1812
Alternate gene names: NA
Gene position: 1916897-1917244 (Clockwise)
Preceding gene: 33864073
Following gene: 33864081
Centisome position: 79.51
GC content: 37.07
Gene sequence:
>348_bases ATGACAAGCCAAAGCACATTTAAAAGCTGCTTTTCTTATACCTTGAGCAAGATTTCATCAGACTCGATCCTTAATTTATT TAGGCTCCACACAGTTTCCATAGAGATCATAATCATTCAGGTCCTCTTTCACATCTTTTCAAGACTCTTAGAGAATTTAA TTCTCAAAGGTCAGATTCTATGTATAGGAATTTTAGTTTTTGCTATTCAATCAGCAAATATTCCTGACATTCTCAGAATC TCTTACCCTCTACTCTATACAGATGAGTTGGAAGGCTTGACTGAGGGTCAGAAGAATGAGAGTAATGCTGCGTCATGTTG CACTGAGTATAACCCGATTACTTGCTGA
Upstream 100 bases:
>100_bases GATATTACTTATTGGTGTTTCCATCATTACCTTCCTGTCTAATTAAATGATGTAGCCTTATTGGGATCAGAATCGAGATG GCGAGTAGAAGCAATCTGAG
Downstream 100 bases:
>100_bases TTGGTGATGATTCTCCTTCCGTTTCCTACTCAAAGCCACTGCAGTTAAAGGGGCTTTTATTTCTTCAATCACGCCCATAA CTCCGCATACAAGCTTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTSQSTFKSCFSYTLSKISSDSILNLFRLHTVSIEIIIIQVLFHIFSRLLENLILKGQILCIGILVFAIQSANIPDILRI SYPLLYTDELEGLTEGQKNESNAASCCTEYNPITC
Sequences:
>Translated_115_residues MTSQSTFKSCFSYTLSKISSDSILNLFRLHTVSIEIIIIQVLFHIFSRLLENLILKGQILCIGILVFAIQSANIPDILRI SYPLLYTDELEGLTEGQKNESNAASCCTEYNPITC >Mature_114_residues TSQSTFKSCFSYTLSKISSDSILNLFRLHTVSIEIIIIQVLFHIFSRLLENLILKGQILCIGILVFAIQSANIPDILRIS YPLLYTDELEGLTEGQKNESNAASCCTEYNPITC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12894; Mature: 12763
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQSTFKSCFSYTLSKISSDSILNLFRLHTVSIEIIIIQVLFHIFSRLLENLILKGQIL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH CIGILVFAIQSANIPDILRISYPLLYTDELEGLTEGQKNESNAASCCTEYNPITC HHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure TSQSTFKSCFSYTLSKISSDSILNLFRLHTVSIEIIIIQVLFHIFSRLLENLILKGQIL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH CIGILVFAIQSANIPDILRISYPLLYTDELEGLTEGQKNESNAASCCTEYNPITC HHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA