| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is lon2 [H]
Identifier: 33864051
GI number: 33864051
Start: 1883282
End: 1883944
Strand: Direct
Name: lon2 [H]
Synonym: PMT1784
Alternate gene names: 33864051
Gene position: 1883282-1883944 (Clockwise)
Preceding gene: 33864050
Following gene: 33864052
Centisome position: 78.12
GC content: 53.09
Gene sequence:
>663_bases GTGACCGACCTGTCCGTCAGGGAGTTGCCTCTCTTCCCTCTGCCGGATGTCGTCTTATTCCCCCAAGAAGTGCTTCCACT GCACATTTTTGAGTCTCGTTACCGAATGATGCTTCAGAGTGTGCTTGAAAGTGATCGGCGTTTTGGTGTGCTGCGCTGGG ATCCTCAAACAAAAACAATGGCGAATGTGGGATGTTGCGCAGAGATCCTGCAACACCAAACATCCAAAGACGGACGCAGC AATATCGTCACCCTTGGACAGCAGCGCTTCCGAGTGCTCGATGTGATTAGAGACGCCCCTTTCCGCACTGCCATGGTGAG CTGGATCGAGGATGACCAAATGGATAACCACAGCCAGCTAGAGGAGCTATCAATCAGCGTTGCAAAAGCCCTACACGATG TGGTGATGCTTACAGGCAAGCTCACAGATTCAGACATCACCATGCCGGATGACCTGCCTGATCTTCCTAGGGAACTCTCT TTCTGGATCGGAGCCCATCTCGGGGGACCTGTGGCTGAAGAGCAACAGGCACTACTGGAGCTCACAAGAACCAGCCATCG CCTGCAGCGTGAATACGAGATGCTTGACCACACCCGCCGTCAGCTTGCAGCAAGGACTGCACTCAAAGAAAGCCTCACCA ACGTCGATCAAGCCAACAATTAA
Upstream 100 bases:
>100_bases CTCGACCTCCCAAGTGGTGTTGACATTGAAGTGAAACTCTGAAGGTCTTCCAAGAAGTGTGCAGGCTAACTAGGCTTTTA ATCTCTCTAGGGCATTATCT
Downstream 100 bases:
>100_bases TGGACCTTTGGGTGTGGATATTGATCCTGGCAGGGACAACCCTGACTTCTGCTGTAGTGATCTGGACCCAACGGGATCGA CGATACAAATCAAGCGCCAG
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La 2 [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTDLSVRELPLFPLPDVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDPQTKTMANVGCCAEILQHQTSKDGRS NIVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQLEELSISVAKALHDVVMLTGKLTDSDITMPDDLPDLPRELS FWIGAHLGGPVAEEQQALLELTRTSHRLQREYEMLDHTRRQLAARTALKESLTNVDQANN
Sequences:
>Translated_220_residues MTDLSVRELPLFPLPDVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDPQTKTMANVGCCAEILQHQTSKDGRS NIVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQLEELSISVAKALHDVVMLTGKLTDSDITMPDDLPDLPRELS FWIGAHLGGPVAEEQQALLELTRTSHRLQREYEMLDHTRRQLAARTALKESLTNVDQANN >Mature_219_residues TDLSVRELPLFPLPDVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDPQTKTMANVGCCAEILQHQTSKDGRSN IVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQLEELSISVAKALHDVVMLTGKLTDSDITMPDDLPDLPRELSF WIGAHLGGPVAEEQQALLELTRTSHRLQREYEMLDHTRRQLAARTALKESLTNVDQANN
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI73747840, Length=136, Percent_Identity=33.0882352941176, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI37622896, Length=136, Percent_Identity=33.0882352941176, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI148528975, Length=243, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI87080813, Length=131, Percent_Identity=32.0610687022901, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786643, Length=195, Percent_Identity=24.6153846153846, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 25189; Mature: 25058
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSVRELPLFPLPDVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDPQTKTM CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH ANVGCCAEILQHQTSKDGRSNIVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH EELSISVAKALHDVVMLTGKLTDSDITMPDDLPDLPRELSFWIGAHLGGPVAEEQQALLE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LTRTSHRLQREYEMLDHTRRQLAARTALKESLTNVDQANN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDLSVRELPLFPLPDVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDPQTKTM CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH ANVGCCAEILQHQTSKDGRSNIVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH EELSISVAKALHDVVMLTGKLTDSDITMPDDLPDLPRELSFWIGAHLGGPVAEEQQALLE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LTRTSHRLQREYEMLDHTRRQLAARTALKESLTNVDQANN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8331083; 8331082 [H]