| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864045
Identifier: 33864045
GI number: 33864045
Start: 1876447
End: 1878198
Strand: Direct
Name: 33864045
Synonym: PMT1778
Alternate gene names: NA
Gene position: 1876447-1878198 (Clockwise)
Preceding gene: 33864042
Following gene: 33864046
Centisome position: 77.83
GC content: 54.45
Gene sequence:
>1752_bases ATGGTTTCTCCTCCTCCCCCACCTCCCACTGTTGAGGTAAGAGCCGCGAACTTATTTGTTGGTGATCGCCTCAACATCGA TGGTCAGTTAATCGAGGCCCCTTGGCGCTGGAGAGGCCATAGGGATGGCACTGCAAACCAGCTCTGGCTTCCCCTGGATC TACTGGTCGGACGTTTTGGCTTCCGCAGGTCCACCCAGCCAAACGGACAGCAATTGCAATGGTATGGAAGCAAAGCCTCT CTGAAATCCCTCCCACAAATCACACTTCAAGATGAAGTGGCATTGAATGTGGCCGAATGGCTCACGACGACAGGAGTCAA GATCAAGCGGAAAAGCAAGACCCTTCACGTTGAACTGCCAACACCACGCCTCAAAGGTCTTCGGCAGGGCAAGGGCAGCA ATTCAAATCGTCTGGTGCTTGACCTAAGCGGTCCGGCGCTCGTGCAAAGCCTTGACAACAATCTCCTTCTTAATCTTCAG GCCACCGTCCAGCAGCGTAGGCAGATGAAGGCATTAGGCCTGATGCCCAAGCAGCAGCGCAATGGCCTAATGCTCATCGG TCAGGCAGAAGCCCTAAGCAGCCTCACCCTGGACAAACCCTGGCGCATTGTCTTGGACGGTATTGGCAAGCACAGCAACG CAACAAATCTGCGCTCACCACTGCTCAATCCATCCATCCAGGCCCTCATCCAGCGCGGCCTGATCTTCGACACAAAAGTG GTGAACGTTGGGGTCAAACCATTGCAAATCACCAGGGTCGGTACAAATCTGTCAAAGCAAGGTCTGCTCCTCAGGCCTCT GCCGCAAATTAACCATCAACAAGGCCTGCGTTTTCTCAACCACTTAGCCCAACCTGCAGACGCTCTGATCGCCATCAACG GGGGTTTCTTCAATCGAGTGCGCCAGTTGCCCCTAGGGGCCTTAAGACGAGATGGCAGATGGTTTTCAGGCCCCATCCTC AATCGAGGGGCAATCGGCTGGGGCCCTACAGGACATCTATCCTTCGGCCGCCTGCAACTTCAACAAGAACTTCAAGGTTC TAAAGGGCAGAGATGGAATCTTGAAACCTTGAATAGTGGCTATGTGCAGCGAGGCCTGAGTCGTTACACCAGAGCCTGGG GGCCTATCTACCAAGCCCTCAGCGGAGAAGAAAAAGCAATGATGATCATCAATGGGCGAGTCGTACAGAGCTTCCAACAA GTGCAGCTGGCCCGGGGGGTTCCTCTGAGCAAGGATGGGGATCTGGTCGTAGCCAGAGGAGGCTTCCCTTTACCGGCGGC GACTGGTGAAACAGTGGTCATAAGGATGAAAGCATCACATCCTCTTGGCGAACTGCCTCAAGTGCTTGGTGGTGGTCCAT TGCTGCTGCAAAACGGGCGGGTGGTTCTGTCTGGAAGACAAGAAGGCTTCAGCCCAAGCTTTCTATCCCTTGCTGCTCCC CGCAGTGTGGTGGGCCAAGGTGGTGGCAAGCTCTGGCTACTCACTCTCAAAGGGGCCAGGGGCAGCGATCCAACCCTGCT GGAGACAAGCCTAGCCCTGCAACAACTGGGGATCAGAGACGGCCTGAACTTAGATGGAGGCAGTTCAACGTCCCTGTTGG TAGCGAATCAATTGGTTGTAACAGGTCGAGGCACACCCCCCAGAATCCACAACGGCCTTGGCCTCATTTTGCGCCACCAC AAAGGCAATCCTAAAAAAGCTAATGAGCCTCATAAAAATGCCAGAGGTCAGGAGCGAATCGCCAACAAATAA
Upstream 100 bases:
>100_bases ACCGCAGTGGACTGCGTTCACAGTGAAAAGCTCAATCAGTGATCCTAGGCAGGCGCCCTCCTCTAAGACTTAGACGAATG AGAGGACTAGCGTCGAAATC
Downstream 100 bases:
>100_bases TTAACGAGATCAAGCTTGGCATCTCGCCCAACACAACAGAAGCACTGCAAGGGCCCATGCCTCCCTGATCACCACATCCT CCATCGCTTTTAAGATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MVSPPPPPPTVEVRAANLFVGDRLNIDGQLIEAPWRWRGHRDGTANQLWLPLDLLVGRFGFRRSTQPNGQQLQWYGSKAS LKSLPQITLQDEVALNVAEWLTTTGVKIKRKSKTLHVELPTPRLKGLRQGKGSNSNRLVLDLSGPALVQSLDNNLLLNLQ ATVQQRRQMKALGLMPKQQRNGLMLIGQAEALSSLTLDKPWRIVLDGIGKHSNATNLRSPLLNPSIQALIQRGLIFDTKV VNVGVKPLQITRVGTNLSKQGLLLRPLPQINHQQGLRFLNHLAQPADALIAINGGFFNRVRQLPLGALRRDGRWFSGPIL NRGAIGWGPTGHLSFGRLQLQQELQGSKGQRWNLETLNSGYVQRGLSRYTRAWGPIYQALSGEEKAMMIINGRVVQSFQQ VQLARGVPLSKDGDLVVARGGFPLPAATGETVVIRMKASHPLGELPQVLGGGPLLLQNGRVVLSGRQEGFSPSFLSLAAP RSVVGQGGGKLWLLTLKGARGSDPTLLETSLALQQLGIRDGLNLDGGSSTSLLVANQLVVTGRGTPPRIHNGLGLILRHH KGNPKKANEPHKNARGQERIANK
Sequences:
>Translated_583_residues MVSPPPPPPTVEVRAANLFVGDRLNIDGQLIEAPWRWRGHRDGTANQLWLPLDLLVGRFGFRRSTQPNGQQLQWYGSKAS LKSLPQITLQDEVALNVAEWLTTTGVKIKRKSKTLHVELPTPRLKGLRQGKGSNSNRLVLDLSGPALVQSLDNNLLLNLQ ATVQQRRQMKALGLMPKQQRNGLMLIGQAEALSSLTLDKPWRIVLDGIGKHSNATNLRSPLLNPSIQALIQRGLIFDTKV VNVGVKPLQITRVGTNLSKQGLLLRPLPQINHQQGLRFLNHLAQPADALIAINGGFFNRVRQLPLGALRRDGRWFSGPIL NRGAIGWGPTGHLSFGRLQLQQELQGSKGQRWNLETLNSGYVQRGLSRYTRAWGPIYQALSGEEKAMMIINGRVVQSFQQ VQLARGVPLSKDGDLVVARGGFPLPAATGETVVIRMKASHPLGELPQVLGGGPLLLQNGRVVLSGRQEGFSPSFLSLAAP RSVVGQGGGKLWLLTLKGARGSDPTLLETSLALQQLGIRDGLNLDGGSSTSLLVANQLVVTGRGTPPRIHNGLGLILRHH KGNPKKANEPHKNARGQERIANK >Mature_583_residues MVSPPPPPPTVEVRAANLFVGDRLNIDGQLIEAPWRWRGHRDGTANQLWLPLDLLVGRFGFRRSTQPNGQQLQWYGSKAS LKSLPQITLQDEVALNVAEWLTTTGVKIKRKSKTLHVELPTPRLKGLRQGKGSNSNRLVLDLSGPALVQSLDNNLLLNLQ ATVQQRRQMKALGLMPKQQRNGLMLIGQAEALSSLTLDKPWRIVLDGIGKHSNATNLRSPLLNPSIQALIQRGLIFDTKV VNVGVKPLQITRVGTNLSKQGLLLRPLPQINHQQGLRFLNHLAQPADALIAINGGFFNRVRQLPLGALRRDGRWFSGPIL NRGAIGWGPTGHLSFGRLQLQQELQGSKGQRWNLETLNSGYVQRGLSRYTRAWGPIYQALSGEEKAMMIINGRVVQSFQQ VQLARGVPLSKDGDLVVARGGFPLPAATGETVVIRMKASHPLGELPQVLGGGPLLLQNGRVVLSGRQEGFSPSFLSLAAP RSVVGQGGGKLWLLTLKGARGSDPTLLETSLALQQLGIRDGLNLDGGSSTSLLVANQLVVTGRGTPPRIHNGLGLILRHH KGNPKKANEPHKNARGQERIANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63518; Mature: 63518
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPPPPPPTVEVRAANLFVGDRLNIDGQLIEAPWRWRGHRDGTANQLWLPLDLLVGRFG CCCCCCCCCEEEEEEEEEEECCEECCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCC FRRSTQPNGQQLQWYGSKASLKSLPQITLQDEVALNVAEWLTTTGVKIKRKSKTLHVELP CCCCCCCCCCEEEEECCCHHHHHCCCEEECHHHHHHHHHHHHHCCEEEEECCCEEEEECC TPRLKGLRQGKGSNSNRLVLDLSGPALVQSLDNNLLLNLQATVQQRRQMKALGLMPKQQR CHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCC NGLMLIGQAEALSSLTLDKPWRIVLDGIGKHSNATNLRSPLLNPSIQALIQRGLIFDTKV CCEEEEECHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCCCEEEEEE VNVGVKPLQITRVGTNLSKQGLLLRPLPQINHQQGLRFLNHLAQPADALIAINGGFFNRV EECCCCEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHH RQLPLGALRRDGRWFSGPILNRGAIGWGPTGHLSFGRLQLQQELQGSKGQRWNLETLNSG HHCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCH YVQRGLSRYTRAWGPIYQALSGEEKAMMIINGRVVQSFQQVQLARGVPLSKDGDLVVARG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECC GFPLPAATGETVVIRMKASHPLGELPQVLGGGPLLLQNGRVVLSGRQEGFSPSFLSLAAP CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCHHHHCCC RSVVGQGGGKLWLLTLKGARGSDPTLLETSLALQQLGIRDGLNLDGGSSTSLLVANQLVV HHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEE TGRGTPPRIHNGLGLILRHHKGNPKKANEPHKNARGQERIANK ECCCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MVSPPPPPPTVEVRAANLFVGDRLNIDGQLIEAPWRWRGHRDGTANQLWLPLDLLVGRFG CCCCCCCCCEEEEEEEEEEECCEECCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCC FRRSTQPNGQQLQWYGSKASLKSLPQITLQDEVALNVAEWLTTTGVKIKRKSKTLHVELP CCCCCCCCCCEEEEECCCHHHHHCCCEEECHHHHHHHHHHHHHCCEEEEECCCEEEEECC TPRLKGLRQGKGSNSNRLVLDLSGPALVQSLDNNLLLNLQATVQQRRQMKALGLMPKQQR CHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCC NGLMLIGQAEALSSLTLDKPWRIVLDGIGKHSNATNLRSPLLNPSIQALIQRGLIFDTKV CCEEEEECHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCCCEEEEEE VNVGVKPLQITRVGTNLSKQGLLLRPLPQINHQQGLRFLNHLAQPADALIAINGGFFNRV EECCCCEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHH RQLPLGALRRDGRWFSGPILNRGAIGWGPTGHLSFGRLQLQQELQGSKGQRWNLETLNSG HHCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCH YVQRGLSRYTRAWGPIYQALSGEEKAMMIINGRVVQSFQQVQLARGVPLSKDGDLVVARG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECC GFPLPAATGETVVIRMKASHPLGELPQVLGGGPLLLQNGRVVLSGRQEGFSPSFLSLAAP CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCHHHHCCC RSVVGQGGGKLWLLTLKGARGSDPTLLETSLALQQLGIRDGLNLDGGSSTSLLVANQLVV HHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEE TGRGTPPRIHNGLGLILRHHKGNPKKANEPHKNARGQERIANK ECCCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA