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The map label for this gene is 33863987

Identifier: 33863987

GI number: 33863987

Start: 1823565

End: 1824068

Strand: Reverse

Name: 33863987

Synonym: PMT1720

Alternate gene names: NA

Gene position: 1824068-1823565 (Counterclockwise)

Preceding gene: 33863989

Following gene: 33863986

Centisome position: 75.66

GC content: 53.77

Gene sequence:

>504_bases
ATGCCAGGGCTGCTGGAGTTTGATCGTAATTGCCTGATGGTTCTTCGTCGCAGCTTATTGGCTGTGGCGCCATTTGAGGG
ATGTGCTCTTTTATTGGGTGATCAAGATGATTCTAATAGTGATAAAGGCTGCAGTATCTGGAATGTTCGGCTGATTTGGC
CCTGCTGCAATGTATGGGAGCCGGGAATGTCAAGCCTCCCTGAAGGCTCGCTTGATCCGAATCTTGGGGCTGAGTTGCTG
CCATCACGCAAGTGTCGCTTTGCTTTGGATCCTCGTGAACAGTTGCAGGCTCAACGCTTTGCCAGAGAGCACAATTGGCA
GGTGTTGGGCAGTGCCCATTCGCATCCTGGCGGTGAGGCTGTGCCGTCCGTTATGGATCATCGCTGGGCCATTTTGCCGT
CGTTACTGGTGATCGTGGCTGGTTCAGGCAATGTGCGCGCTTGGTGGATGACAGGAGTGCAACCTGGCCAGCAGCATGAG
GTTGCGCATTTGGGACAGTGGTAA

Upstream 100 bases:

>100_bases
TTTTCTGTGGTGGATTGTTCGTTTGTCACGGTGTTGATGTCGCTCATGAACACGAAACCGATGGCAAATCTTTGCCGAGC
GTATCGAAAGGATCTTTGTT

Downstream 100 bases:

>100_bases
GGGCATAGCTAGCGGCACTCTTTCCCCTATGGGTCTTCACGAAACCGTTGATGTTGACCTGAGCCCCGATGAGTTAGAGC
GTTTTTCTCGTCATCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDKGCSIWNVRLIWPCCNVWEPGMSSLPEGSLDPNLGAELL
PSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWAILPSLLVIVAGSGNVRAWWMTGVQPGQQHE
VAHLGQW

Sequences:

>Translated_167_residues
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDKGCSIWNVRLIWPCCNVWEPGMSSLPEGSLDPNLGAELL
PSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWAILPSLLVIVAGSGNVRAWWMTGVQPGQQHE
VAHLGQW
>Mature_166_residues
PGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDKGCSIWNVRLIWPCCNVWEPGMSSLPEGSLDPNLGAELLP
SRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWAILPSLLVIVAGSGNVRAWWMTGVQPGQQHEV
AHLGQW

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18513; Mature: 18382

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDKGCSIWNVRLIWPCCNVWE
CCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC
PGMSSLPEGSLDPNLGAELLPSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEA
CCHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCH
VPSVMDHRWAILPSLLVIVAGSGNVRAWWMTGVQPGQQHEVAHLGQW
HHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
PGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDKGCSIWNVRLIWPCCNVWE
CCHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC
PGMSSLPEGSLDPNLGAELLPSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEA
CCHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCH
VPSVMDHRWAILPSLLVIVAGSGNVRAWWMTGVQPGQQHEVAHLGQW
HHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA