| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863968
Identifier: 33863968
GI number: 33863968
Start: 1800886
End: 1802223
Strand: Direct
Name: 33863968
Synonym: PMT1701
Alternate gene names: NA
Gene position: 1800886-1802223 (Clockwise)
Preceding gene: 33863967
Following gene: 33863969
Centisome position: 74.7
GC content: 56.35
Gene sequence:
>1338_bases TTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGCCAGGGAGACTCAATTCCCTGCAGCGGATCGTATCAGCCACTC TGCTAGCTCTCTGCTCGTGATTTGCAACGGGCATGGCGAGGATCTGATTGCACTACGGGTGTTGGAGGCACTACATCGCA AATGTCCGAATCTGCCCATTGAAGTGCTTCCCCTCGTAGGGATAGGACAAGCTTTTGAACATGCCTTAGCCGCTGGATGG CTTAAGCGCCTGAGCCCTTCAGCGCCCTTGCCAAGTGGTGGCTTCAGCAATCAAAGCTTGCGGGGCCTGATTGCTGATCT TGCCGCCGGACTCACTCTGCTCAGCTGGCGACAGTGGCGATGTGTGCGCCGCTCAGCCAAAGCTGGCAAAGCCATTCTGG CAGTAGGAGACCTGTTGCCACTGCTCATGGCATGGAGCAGTGGTGGAACCTATGGCTTCATCGGCACACCGAAAAGTGAT TACACCTGGAGAAGTGGACCAGGCCGGGCCTTGAGCGACCACTACCACCGCCTCAAAGGCAGTGAATGGGATCCCTGGGA ATGGGCCCTAATGCGATCTTCGCGATGCCGAGTGGTTGCCGTTCGTGATCATCTCACCGCCAGAGGACTACGACGCCACG GGGTAGCCGCAACGGCGCCTGGGAACCCAATGATGGATGGATTCAAGGTCGAATCAAGTCCTGCCGCTCTAAACCGATGC CGGCGACTGTTATTGCTCTGTGGCAGTCGAATGCCCGAAGCAGGCACGAATTTCAAGCGACTCCTTGAAGGCCTAGGCCA GCTCGATAGCGATTTACCTCTAGCAGTACTTGTAGCCTTTGGCTCCCAACCCAGCCTCAACCAGCTCGAAGCGATTCTCA GAACCGATGGATACCTACCATCCACCCCCCCCATCGACACCCTGGGAGCCAAGGCCTGCTGGGTCAAAGGTACACAGCTC TTGCTACTCGGGCCTGGTCAATTCAACCGCTGGGCGGCCTGGACCGAAGTGGGCCTTGTCACCGCTGGAACCGCCACAGA ACAACTTGTAGGTCTAGGCATTCCGGCCTTATCGATGCCTGGACCAGGACCACAATTCAAACGACAATTCGCCATACGGC AAAGTCGCCTCTTAGGAGGAGCCGTACTGCCCTGTCAAAGCAAAGAAGAACTGGCAGACAGGCTTCAGAGACTGTTAAAA GACGACTCCCTTCGACAACGATTAGGAAGGATTGGCAACAGACGAATGGGAACAGCTGGCGGCAGTGCTGCACTCGCAGC ACTGATCTCACAGCTTTTATTAGGGGATAGGAGAGCACCTAGACAACGCTCTGTTTGA
Upstream 100 bases:
>100_bases GCTTTTGCAGAGAACTAAGACGAGAACACGCCAGTTACTGCGACTTGTTTGGAGGACATTGTCGAAGGCGGCACCCAGAT TCGAACTGGGGATAAAGGAT
Downstream 100 bases:
>100_bases CACGCCATAGCGGATACTGAACGCTTGCAGCACCACTGCCATGGCGGCCATGCAGGACCATGCCTTAGTGAAAATCTACG CCGAACTGGCCAGCTGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQSSALPLGHAAARETQFPAADRISHSASSLLVICNGHGEDLIALRVLEALHRKCPNLPIEVLPLVGIGQAFEHALAAGW LKRLSPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKAGKAILAVGDLLPLLMAWSSGGTYGFIGTPKSD YTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTARGLRRHGVAATAPGNPMMDGFKVESSPAALNRC RRLLLLCGSRMPEAGTNFKRLLEGLGQLDSDLPLAVLVAFGSQPSLNQLEAILRTDGYLPSTPPIDTLGAKACWVKGTQL LLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKRQFAIRQSRLLGGAVLPCQSKEELADRLQRLLK DDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGDRRAPRQRSV
Sequences:
>Translated_445_residues MQSSALPLGHAAARETQFPAADRISHSASSLLVICNGHGEDLIALRVLEALHRKCPNLPIEVLPLVGIGQAFEHALAAGW LKRLSPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKAGKAILAVGDLLPLLMAWSSGGTYGFIGTPKSD YTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTARGLRRHGVAATAPGNPMMDGFKVESSPAALNRC RRLLLLCGSRMPEAGTNFKRLLEGLGQLDSDLPLAVLVAFGSQPSLNQLEAILRTDGYLPSTPPIDTLGAKACWVKGTQL LLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKRQFAIRQSRLLGGAVLPCQSKEELADRLQRLLK DDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGDRRAPRQRSV >Mature_445_residues MQSSALPLGHAAARETQFPAADRISHSASSLLVICNGHGEDLIALRVLEALHRKCPNLPIEVLPLVGIGQAFEHALAAGW LKRLSPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKAGKAILAVGDLLPLLMAWSSGGTYGFIGTPKSD YTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTARGLRRHGVAATAPGNPMMDGFKVESSPAALNRC RRLLLLCGSRMPEAGTNFKRLLEGLGQLDSDLPLAVLVAFGSQPSLNQLEAILRTDGYLPSTPPIDTLGAKACWVKGTQL LLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKRQFAIRQSRLLGGAVLPCQSKEELADRLQRLLK DDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGDRRAPRQRSV
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47906; Mature: 47906
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSALPLGHAAARETQFPAADRISHSASSLLVICNGHGEDLIALRVLEALHRKCPNLPI CCCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCE EVLPLVGIGQAFEHALAAGWLKRLSPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWR EEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CVRRSAKAGKAILAVGDLLPLLMAWSSGGTYGFIGTPKSDYTWRSGPGRALSDHYHRLKG HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCC SEWDPWEWALMRSSRCRVVAVRDHLTARGLRRHGVAATAPGNPMMDGFKVESSPAALNRC CCCCCHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEECCCCCCCCCEEECCCHHHHHHH RRLLLLCGSRMPEAGTNFKRLLEGLGQLDSDLPLAVLVAFGSQPSLNQLEAILRTDGYLP HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC STPPIDTLGAKACWVKGTQLLLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMP CCCCCHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHCEEECCCHHHHHHHCCCCCCCCC GPGPQFKRQFAIRQSRLLGGAVLPCQSKEELADRLQRLLKDDSLRQRLGRIGNRRMGTAG CCCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GSAALAALISQLLLGDRRAPRQRSV CHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQSSALPLGHAAARETQFPAADRISHSASSLLVICNGHGEDLIALRVLEALHRKCPNLPI CCCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCE EVLPLVGIGQAFEHALAAGWLKRLSPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWR EEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CVRRSAKAGKAILAVGDLLPLLMAWSSGGTYGFIGTPKSDYTWRSGPGRALSDHYHRLKG HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCC SEWDPWEWALMRSSRCRVVAVRDHLTARGLRRHGVAATAPGNPMMDGFKVESSPAALNRC CCCCCHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEECCCCCCCCCEEECCCHHHHHHH RRLLLLCGSRMPEAGTNFKRLLEGLGQLDSDLPLAVLVAFGSQPSLNQLEAILRTDGYLP HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC STPPIDTLGAKACWVKGTQLLLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMP CCCCCHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHCEEECCCHHHHHHHCCCCCCCCC GPGPQFKRQFAIRQSRLLGGAVLPCQSKEELADRLQRLLKDDSLRQRLGRIGNRRMGTAG CCCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GSAALAALISQLLLGDRRAPRQRSV CHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA