| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863961
Identifier: 33863961
GI number: 33863961
Start: 1796216
End: 1796710
Strand: Direct
Name: 33863961
Synonym: PMT1694
Alternate gene names: NA
Gene position: 1796216-1796710 (Clockwise)
Preceding gene: 33863960
Following gene: 33863965
Centisome position: 74.5
GC content: 54.34
Gene sequence:
>495_bases ATGCGCTCTCCGATTGTTCCCCTCTTACTGATCAGCCTGTCCATGGTTGCCGGAACAAGTTCGATCGCCGATCCACTCCA AGCTATTGGTCGCTTTGAAAGGATTGCTAGCAAATGTAAATACAGATTGGGAAGCGGCTCTCTGCAGACTTGCCAGGTTG TTCAGATGGATCGCAAGACCGCGACAGTGACTGGGGTACGCTTCATCGGCCGAGGCGTAGAACACGGGTCCAGTCGGCAT CTCACCTTTGTCGCCAACGCACCGGATCAGACCATCCCATTACGCTGTCTATCAGGCAGCTGCACCCTGAACAAGAAAAG ATGGACAGCCACGGTGAGCAGCGTGGCAGAAAGCAAGTTTGATGGGCGAGGGATTGCAGAAGGACTGCCTCAAGCCTGGC CGGTAAAGGGTGATTGTGAGCTTTCTTTGAAACAACTCCGCTGCAGAGCACGGGCCATGAGTGGAGAGATCCTTACCGGA GAAGCCCAACTGTGA
Upstream 100 bases:
>100_bases CCAGAGGATGGGGATGTCCTTTGCAACCACTGTCGGCGAACCGCAATCAATGGCATACGTTGTCTGGGAATGTGTGTCGC TGATAGCGACTATTAACTAG
Downstream 100 bases:
>100_bases GAGACCAACAAGAGCGGGCAACTTCAAGGCGAGGATCCTTATAACTGGCTAGCGAACCTACCTACAAGCTTGTCTAATCT TCGCACCACAAGAAGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRSPIVPLLLISLSMVAGTSSIADPLQAIGRFERIASKCKYRLGSGSLQTCQVVQMDRKTATVTGVRFIGRGVEHGSSRH LTFVANAPDQTIPLRCLSGSCTLNKKRWTATVSSVAESKFDGRGIAEGLPQAWPVKGDCELSLKQLRCRARAMSGEILTG EAQL
Sequences:
>Translated_164_residues MRSPIVPLLLISLSMVAGTSSIADPLQAIGRFERIASKCKYRLGSGSLQTCQVVQMDRKTATVTGVRFIGRGVEHGSSRH LTFVANAPDQTIPLRCLSGSCTLNKKRWTATVSSVAESKFDGRGIAEGLPQAWPVKGDCELSLKQLRCRARAMSGEILTG EAQL >Mature_164_residues MRSPIVPLLLISLSMVAGTSSIADPLQAIGRFERIASKCKYRLGSGSLQTCQVVQMDRKTATVTGVRFIGRGVEHGSSRH LTFVANAPDQTIPLRCLSGSCTLNKKRWTATVSSVAESKFDGRGIAEGLPQAWPVKGDCELSLKQLRCRARAMSGEILTG EAQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17661; Mature: 17661
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPIVPLLLISLSMVAGTSSIADPLQAIGRFERIASKCKYRLGSGSLQTCQVVQMDRKT CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCH ATVTGVRFIGRGVEHGSSRHLTFVANAPDQTIPLRCLSGSCTLNKKRWTATVSSVAESKF HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHCC DGRGIAEGLPQAWPVKGDCELSLKQLRCRARAMSGEILTGEAQL CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure MRSPIVPLLLISLSMVAGTSSIADPLQAIGRFERIASKCKYRLGSGSLQTCQVVQMDRKT CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCH ATVTGVRFIGRGVEHGSSRHLTFVANAPDQTIPLRCLSGSCTLNKKRWTATVSSVAESKF HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHCC DGRGIAEGLPQAWPVKGDCELSLKQLRCRARAMSGEILTGEAQL CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA