| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863931
Identifier: 33863931
GI number: 33863931
Start: 1769179
End: 1769568
Strand: Reverse
Name: 33863931
Synonym: PMT1664
Alternate gene names: NA
Gene position: 1769568-1769179 (Counterclockwise)
Preceding gene: 33863942
Following gene: 33863930
Centisome position: 73.4
GC content: 52.05
Gene sequence:
>390_bases ATGGGTTGTCTTTTGCGTTCCAGATCCATGCCCATCATTCGCTTTGTCCGGGAAGGCAAAGATGTTGAGTGCAAGCAAGG CGAAAATCTCAGGGAGGTTGCCTTGCGCGAGGGGATGGAGCTCTATGGGCTGAAAGGAAAGTTGGGGAACTGTGGAGGTT GTGGTCAGTGCATTACTTGTTTTGTTGGAATTGAGGGGGAAAGCAAAGTTGGTGCGCTTTCACCACGAACTGAGGTTGAG GAAATCAAGCTCAAGCGCCGCCCTGAGAATTGGCGCCTTGCTTGTCAGACCATTGTTATGTCGTCAGTGATCGTCGTGAC TCGACCACAGGAAGCCCTGCTTAATGCCAAGAGTCGACTTGAGGCGGCGCGTGCGCAAAAGCTGTCTTAA
Upstream 100 bases:
>100_bases TCTTAAAAGAGTGGGTTTGGAGGGCTATCGATTTCCTCAGGCTGAGGTTTTGCTGATATTCAGGCTTGGTTACAAACTGC AATGCCGCGCTTGAGACAAA
Downstream 100 bases:
>100_bases TAGACCATCAAACCCCTCGAATCAGAGGGGTTTGATGGTGTGATCTCAGCTGGTTTTGAAAGGGCGTGGGCTGCTACGCC CGGTGACGAGGCTTGAGCAG
Product: ferredoxin
Products: NA
Alternate protein names: Ferredoxin 2Fe-2S Type; Hydrogenase Component
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGCLLRSRSMPIIRFVREGKDVECKQGENLREVALREGMELYGLKGKLGNCGGCGQCITCFVGIEGESKVGALSPRTEVE EIKLKRRPENWRLACQTIVMSSVIVVTRPQEALLNAKSRLEAARAQKLS
Sequences:
>Translated_129_residues MGCLLRSRSMPIIRFVREGKDVECKQGENLREVALREGMELYGLKGKLGNCGGCGQCITCFVGIEGESKVGALSPRTEVE EIKLKRRPENWRLACQTIVMSSVIVVTRPQEALLNAKSRLEAARAQKLS >Mature_128_residues GCLLRSRSMPIIRFVREGKDVECKQGENLREVALREGMELYGLKGKLGNCGGCGQCITCFVGIEGESKVGALSPRTEVEE IKLKRRPENWRLACQTIVMSSVIVVTRPQEALLNAKSRLEAARAQKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14280; Mature: 14149
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCLLRSRSMPIIRFVREGKDVECKQGENLREVALREGMELYGLKGKLGNCGGCGQCITC CCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCEEEE FVGIEGESKVGALSPRTEVEEIKLKRRPENWRLACQTIVMSSVIVVTRPQEALLNAKSRL EECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH EAARAQKLS HHHHHHCCC >Mature Secondary Structure GCLLRSRSMPIIRFVREGKDVECKQGENLREVALREGMELYGLKGKLGNCGGCGQCITC CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCEEEE FVGIEGESKVGALSPRTEVEEIKLKRRPENWRLACQTIVMSSVIVVTRPQEALLNAKSRL EECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH EAARAQKLS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA