Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863905

Identifier: 33863905

GI number: 33863905

Start: 1739528

End: 1739911

Strand: Direct

Name: 33863905

Synonym: PMT1638

Alternate gene names: NA

Gene position: 1739528-1739911 (Clockwise)

Preceding gene: 33863904

Following gene: 33863906

Centisome position: 72.15

GC content: 56.51

Gene sequence:

>384_bases
GTGGATCAAAGAACGCGCATCGTGGCTGCAGTCATCAAAGCAGTGAAGTTGCCTCCGCGGTTTCGACTGCGGCTGGTCAA
AGAAGATCCCGTTCGGCTTGAACTAAGCCTCACCCCTGCTTACGGCAAACAGCCGATCCAAGTGGGATTGGTCGAGTCTC
TTGACCTGGTAGCTCGACGCGATCGAGAAGGACGCATCCCTAGAGACTTGCAGGGGACATGGGATTGGACGGTCCGACAC
GGCGAGGTAAGCACCGGGGGATGGAATCCCTTTCTCAAGGAAGCACTACAAACCATGTTTGAAACAGGGCTACCAGCCAT
CGTTTACGAAGAACTGACAGGCGAGGACTATCACCCCGTTGACGGCACCCGCCACGTGCGCTGA

Upstream 100 bases:

>100_bases
GAGACAACGAGCCACCCCAGTCAACAGAAACTCCTGCTGAATAAATTAGAAAGTCAGTGTCAAAGCTGGCACTGGATTGG
ACTCGATTGGGGAAGCCCTG

Downstream 100 bases:

>100_bases
CTGTGAAGGATGTGAAGCCCTGCGAACTACCAGGGCTACAAACAAGGACAAGGGGCTAGACCAGTACAGTTCCGGCTCTT
AAGGTTTTCTTCATGAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDQRTRIVAAVIKAVKLPPRFRLRLVKEDPVRLELSLTPAYGKQPIQVGLVESLDLVARRDREGRIPRDLQGTWDWTVRH
GEVSTGGWNPFLKEALQTMFETGLPAIVYEELTGEDYHPVDGTRHVR

Sequences:

>Translated_127_residues
MDQRTRIVAAVIKAVKLPPRFRLRLVKEDPVRLELSLTPAYGKQPIQVGLVESLDLVARRDREGRIPRDLQGTWDWTVRH
GEVSTGGWNPFLKEALQTMFETGLPAIVYEELTGEDYHPVDGTRHVR
>Mature_127_residues
MDQRTRIVAAVIKAVKLPPRFRLRLVKEDPVRLELSLTPAYGKQPIQVGLVESLDLVARRDREGRIPRDLQGTWDWTVRH
GEVSTGGWNPFLKEALQTMFETGLPAIVYEELTGEDYHPVDGTRHVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14528; Mature: 14528

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRTRIVAAVIKAVKLPPRFRLRLVKEDPVRLELSLTPAYGKQPIQVGLVESLDLVARR
CCCHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHC
DREGRIPRDLQGTWDWTVRHGEVSTGGWNPFLKEALQTMFETGLPAIVYEELTGEDYHPV
CCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCC
DGTRHVR
CCCCCCC
>Mature Secondary Structure
MDQRTRIVAAVIKAVKLPPRFRLRLVKEDPVRLELSLTPAYGKQPIQVGLVESLDLVARR
CCCHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHC
DREGRIPRDLQGTWDWTVRHGEVSTGGWNPFLKEALQTMFETGLPAIVYEELTGEDYHPV
CCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCC
DGTRHVR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA