| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hflX [H]
Identifier: 33863893
GI number: 33863893
Start: 1727169
End: 1728845
Strand: Direct
Name: hflX [H]
Synonym: PMT1626
Alternate gene names: 33863893
Gene position: 1727169-1728845 (Clockwise)
Preceding gene: 33863892
Following gene: 33863894
Centisome position: 71.64
GC content: 55.4
Gene sequence:
>1677_bases TTGAAACAAGCCCACCTCGCTGGCCGCACCAAGGGACTACGCCCTTCACAACAAAGACAATTAGAACGCCTCAGCCACCG CCGGCATCCCGAAAGGGAAGGCGCCGATCAGCTAACTCTAGAACGGCTAGCTGAAAAGGTGATTGAGCTATGCCAACCAC TCCATTTAGTGCTGGATAGCCGTGGATTGTGCCGCCTTCTTTGGGTCGGTCCTCTCGATGGATCCGGCCAACTTCTCGCC CATCTTCCTGAATCACCCCGTCGCAAGAGCGCTGGATGGCGCTTAATCAGCTGCTCTCTAACGCTTCAGCGAAACAACCT CAGGCCAGAACAACATGATGCAATCGTGGCACTCGATCTAGCACCGAACTCCTGGCTACGTTTTGCCCCCACATCAGATC GAGGAGGTCGCAGGATTGCGGCCCTCTGGCAACCAGATCCAAAGGAGATCTCGGGATGGAGCTTGATCGAAGCCAACGGA CTAAGCGAGCTCTGCCAACACAGCCAAGGATCAACCGTCAAGCCAGAAGTCACCCCCCTACCGTCAAAGGACAGTAGGGA ACGGGTCCTACTACTGACCCTTACGGGACCAGAGCAAAGCCGCAGCGAACGCGACCTTGCTGAGCTCGAGGGGTTGGTAC GCAGTGCAGGGGGGCATCCTGTAGCAGTTGTGCGACAAAAGCAGGGGGCGCCTAATCCTCAGACCCTCTGGGGCAAGGGG AAACTACAAGAGACCGCCTTGGAAGTTCGGCGTCATAGCGCTTCTCTAGTGATCACAGACCGTGAGCTCAATCCTGTTCA AGTCAGGAATCTGGAGCGCTATCTCGACTGCCCTGTCATGGATCGCAGTGAATTAATCCTAGACATCTTTGCCCAGCGCG CCTCTAGTGCAGCAGGCCGCCTTCAAGTGGAACTAGCCCAACTTCGCTATCGCATGCCAAGGCTAATGGGGCGAGGTCGC AGCCTATCCCGTCAGGGAGGTGGCATCGGCACACGCGGGCCCGGCGAGACCCAACTCGAGAAAGACCGGCGTGCGATTAC ACGACGCATCGAGCACTTGTTACGTGAGGTACGGCAACTGCAAAACCATCGCGCCCGACTACGAAACCGCAGGGAAGGTC TACCAAGGGTTGCACTCGTGGGTTATACCAATGCGGGGAAATCATCCCTACTCAATGCTCTCTGCAGTCGAAACGAGCAC AACAAAGTGCTGGCAGAGAACAAACTGTTTGCAACCTTGGATCCAACCACCCGACGATTGTTGATTCCTCAGACAGGTGG AAAACCCCTTGAGCTTCTTATCACAGACACTGTGGGCTTCATCCGTGAACTGCCAGCGCCATTAGTGGAAGCCTTTCGGG CCACTCTGGAGGAAACTCTTGAAGCCGATCTCCTCCTAGTGGTTGTGGACTTGTCAGACACAGACTGGCAAGCCCAACTG GACACAGTGCATCAGTTGCTTAATTCCCTTGGCTCAGAATCAATCCGGCAGGTGATAGCCAATCAAATTGATCGCTGTGA TAGCAGTGCACTTGAGACAATCCGCAGCATCGACCCGAAGGTGATTTATCTCTCCGCGGCCTCAGGTGCCGGGCTGCAAG GACTCAAACACTGGCTGAAGGACCAATTCTGGGGTCACAGAGCAGAATCGGCCCCTCTGCATTCTGTAAATACCTAA
Upstream 100 bases:
>100_bases CAGGTCCTCTGGCTTTCCAAATTCGCCGGGGTGCCTATCTAACAAAACTACCTGGATTGTCTCTAGGCCTGCGCTCAGGC GGGGCCTGGCTGCTCGGACA
Downstream 100 bases:
>100_bases CTATGGCTGTGCTGAGCACCGCTATTCAAAACCCCCAAGCCCTCATCACCCTGGCGGTGTTGTTGCTGGCGGTGGTGCTC TTCATCAGCGGTGCCCTTGC
Product: GTP-binding protein, transport associated
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEKVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKSAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTSDRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTVKPEVTPLPSKDSRERVLLLTLTGPEQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELNPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH NKVLAENKLFATLDPTTRRLLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGSESIRQVIANQIDRCDSSALETIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHRAESAPLHSVNT
Sequences:
>Translated_558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEKVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKSAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTSDRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTVKPEVTPLPSKDSRERVLLLTLTGPEQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELNPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH NKVLAENKLFATLDPTTRRLLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGSESIRQVIANQIDRCDSSALETIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHRAESAPLHSVNT >Mature_558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEKVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKSAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTSDRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTVKPEVTPLPSKDSRERVLLLTLTGPEQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELNPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH NKVLAENKLFATLDPTTRRLLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGSESIRQVIANQIDRCDSSALETIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHRAESAPLHSVNT
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=241, Percent_Identity=32.7800829875519, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310133116, Length=220, Percent_Identity=32.7272727272727, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI310124269, Length=215, Percent_Identity=32.093023255814, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI310124267, Length=215, Percent_Identity=32.093023255814, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI310124171, Length=215, Percent_Identity=32.093023255814, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI310124169, Length=215, Percent_Identity=32.093023255814, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790615, Length=371, Percent_Identity=42.5876010781671, Blast_Score=251, Evalue=7e-68, Organism=Caenorhabditis elegans, GI17561038, Length=318, Percent_Identity=29.874213836478, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24650079, Length=357, Percent_Identity=35.0140056022409, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 62334; Mature: 62334
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEKVIELCQPLHLVLDS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGLCRLLWVGPLDGSGQLLAHLPESPRRKSAGWRLISCSLTLQRNNLRPEQHDAIVALDL CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE APNSWLRFAPTSDRGGRRIAALWQPDPKEISGWSLIEANGLSELCQHSQGSTVKPEVTPL CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCC PSKDSRERVLLLTLTGPEQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC KLQETALEVRRHSASLVITDRELNPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGR CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH LQVELAQLRYRMPRLMGRGRSLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEHNKVLAENKLFATLDPTTRRL HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCEE LIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL EEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH DTVHQLLNSLGSESIRQVIANQIDRCDSSALETIRSIDPKVIYLSAASGAGLQGLKHWLK HHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH DQFWGHRAESAPLHSVNT HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEKVIELCQPLHLVLDS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGLCRLLWVGPLDGSGQLLAHLPESPRRKSAGWRLISCSLTLQRNNLRPEQHDAIVALDL CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE APNSWLRFAPTSDRGGRRIAALWQPDPKEISGWSLIEANGLSELCQHSQGSTVKPEVTPL CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCC PSKDSRERVLLLTLTGPEQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC KLQETALEVRRHSASLVITDRELNPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGR CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH LQVELAQLRYRMPRLMGRGRSLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEHNKVLAENKLFATLDPTTRRL HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCEE LIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL EEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH DTVHQLLNSLGSESIRQVIANQIDRCDSSALETIRSIDPKVIYLSAASGAGLQGLKHWLK HHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH DQFWGHRAESAPLHSVNT HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]