Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863841

Identifier: 33863841

GI number: 33863841

Start: 1672463

End: 1673611

Strand: Direct

Name: 33863841

Synonym: PMT1574

Alternate gene names: NA

Gene position: 1672463-1673611 (Clockwise)

Preceding gene: 33863840

Following gene: 33863842

Centisome position: 69.37

GC content: 43.34

Gene sequence:

>1149_bases
TTGGGAACGACACCATTTGTTCTTCAACATCTACGACACCAGCGTAAAAGGAGCATTAGTGCTGTGAGTGGGATTACTTT
TGCCTGTATTTTGATTTTCCTGCAATTAGGATTCTTGGATGCAGTTCTGATGACAGCTACACATCTTTATAGTCGTCTAG
ACTTTGATTTAGTGATCAGCAGCAGAGATGCATTGGAATCAACAATGCCTTACACATTCAACCGTGTCCAAATTGATCGA
TTACGAGCTATTGATGGCGTTGCAAGGGTTGCACCTTTAGATATTGGCTATAAACAGTGGAAAAATCCAATCAATGGAAG
AAATCGTGCTTTGTTGGTGCTTGGTATTGACCCCGACAACAATCTGACGCAGTTTGATTCACTTAGTGGCGATCTTTCGT
TGTTGAATCATCCTGAAACGATTTTTGTCGACACCAAAAGTCGGAATGACTACGGTTTTAAGTTCTTCTTGAATCATTCA
GACCATTGGGCACAGGTCGGTAATCGACGAGAGAAAGTTTCTGGCAGCTTTGAGCTGGGTCCATCTCTCCGTTATGACGG
TAGTATCTTGACTGGAGGTCAAAATTTTCGCCGAATCTTCGGTAGTTACAGCACTGATATCACTAGTGTTGGCCTCTTGA
AATTGCAGCCTAATAGCAATATCCATATGATCAAAGAAAAGATCGAATCTATTTTGCCAGATAAGCTTTTGATTCTAACA
AAAGATCAAGTGATTGAGCGCGATAAACGTTACTGGCTTGTTTCTACATCGATTGGATATGTTTTTGGGATAGGAGCATG
CATGGGACTTCTTGTTGGAATCGTGATTGTTGGTCAGATCATGAACGCTGATGTTTCTACCCACCTGAGTATTTACGCAA
CACTATTGGCCATTGGCTACCCAAAACTGCGCGTTATGTCGCTAATTATCCGATTAGGTCTTGTTGTTAGCGTACTTGCA
ATTCTACCTTCATTGGCTGGCGCTAAGGTTCTTTATTCACTCACCAATCTTGCCACTGGCTTGCCGATGCAGTTGACACT
CCAGCGTGTCATCACTGTTTCACTGCTTTCACTGATCATGGGGGGAGGATCTGCATATCTTTCGGCTCGACGTGTGATGC
GCGCCGATCCCGCGTTACTCTTCAGCTGA

Upstream 100 bases:

>100_bases
TGAATGTTGAGATACAAAGCTCCCCTACTGAAATCGCTTCCTCATATAAATGAAACTCAGAGTATTCCACCCCAACACAT
GGGTCCGAGGGGCTAATGAT

Downstream 100 bases:

>100_bases
GATTATCGCTATGCACAAGATTCCCTTCGCCTGGCTTAATGTCACGAGTGATCGTCAGAAGCTTATTTTTTCAATGCTGG
CTATCAGCTTTGCAGTTTTC

Product: membrane permease or ABC transporter component

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDR
LRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHS
DHWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT
KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLA
ILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS

Sequences:

>Translated_382_residues
MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDR
LRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHS
DHWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT
KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLA
ILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS
>Mature_381_residues
GTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDRL
RAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSD
HWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILTK
DQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLAI
LPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42272; Mature: 42141

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SRDALESTMPYTFNRVQIDRLRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDN
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCC
NLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSDHWAQVGNRREKVSGSFELG
CCCHHHCCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECC
PSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT
CCCEECCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE
KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGY
CHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PKLRVMSLIIRLGLVVSVLAILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GGGSAYLSARRVMRADPALLFS
CCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SRDALESTMPYTFNRVQIDRLRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDN
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCC
NLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSDHWAQVGNRREKVSGSFELG
CCCHHHCCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECC
PSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT
CCCEECCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE
KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGY
CHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PKLRVMSLIIRLGLVVSVLAILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GGGSAYLSARRVMRADPALLFS
CCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA