| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863841
Identifier: 33863841
GI number: 33863841
Start: 1672463
End: 1673611
Strand: Direct
Name: 33863841
Synonym: PMT1574
Alternate gene names: NA
Gene position: 1672463-1673611 (Clockwise)
Preceding gene: 33863840
Following gene: 33863842
Centisome position: 69.37
GC content: 43.34
Gene sequence:
>1149_bases TTGGGAACGACACCATTTGTTCTTCAACATCTACGACACCAGCGTAAAAGGAGCATTAGTGCTGTGAGTGGGATTACTTT TGCCTGTATTTTGATTTTCCTGCAATTAGGATTCTTGGATGCAGTTCTGATGACAGCTACACATCTTTATAGTCGTCTAG ACTTTGATTTAGTGATCAGCAGCAGAGATGCATTGGAATCAACAATGCCTTACACATTCAACCGTGTCCAAATTGATCGA TTACGAGCTATTGATGGCGTTGCAAGGGTTGCACCTTTAGATATTGGCTATAAACAGTGGAAAAATCCAATCAATGGAAG AAATCGTGCTTTGTTGGTGCTTGGTATTGACCCCGACAACAATCTGACGCAGTTTGATTCACTTAGTGGCGATCTTTCGT TGTTGAATCATCCTGAAACGATTTTTGTCGACACCAAAAGTCGGAATGACTACGGTTTTAAGTTCTTCTTGAATCATTCA GACCATTGGGCACAGGTCGGTAATCGACGAGAGAAAGTTTCTGGCAGCTTTGAGCTGGGTCCATCTCTCCGTTATGACGG TAGTATCTTGACTGGAGGTCAAAATTTTCGCCGAATCTTCGGTAGTTACAGCACTGATATCACTAGTGTTGGCCTCTTGA AATTGCAGCCTAATAGCAATATCCATATGATCAAAGAAAAGATCGAATCTATTTTGCCAGATAAGCTTTTGATTCTAACA AAAGATCAAGTGATTGAGCGCGATAAACGTTACTGGCTTGTTTCTACATCGATTGGATATGTTTTTGGGATAGGAGCATG CATGGGACTTCTTGTTGGAATCGTGATTGTTGGTCAGATCATGAACGCTGATGTTTCTACCCACCTGAGTATTTACGCAA CACTATTGGCCATTGGCTACCCAAAACTGCGCGTTATGTCGCTAATTATCCGATTAGGTCTTGTTGTTAGCGTACTTGCA ATTCTACCTTCATTGGCTGGCGCTAAGGTTCTTTATTCACTCACCAATCTTGCCACTGGCTTGCCGATGCAGTTGACACT CCAGCGTGTCATCACTGTTTCACTGCTTTCACTGATCATGGGGGGAGGATCTGCATATCTTTCGGCTCGACGTGTGATGC GCGCCGATCCCGCGTTACTCTTCAGCTGA
Upstream 100 bases:
>100_bases TGAATGTTGAGATACAAAGCTCCCCTACTGAAATCGCTTCCTCATATAAATGAAACTCAGAGTATTCCACCCCAACACAT GGGTCCGAGGGGCTAATGAT
Downstream 100 bases:
>100_bases GATTATCGCTATGCACAAGATTCCCTTCGCCTGGCTTAATGTCACGAGTGATCGTCAGAAGCTTATTTTTTCAATGCTGG CTATCAGCTTTGCAGTTTTC
Product: membrane permease or ABC transporter component
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDR LRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHS DHWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLA ILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS
Sequences:
>Translated_382_residues MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDR LRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHS DHWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLA ILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS >Mature_381_residues GTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVISSRDALESTMPYTFNRVQIDRL RAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDNNLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSD HWAQVGNRREKVSGSFELGPSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILTK DQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGYPKLRVMSLIIRLGLVVSVLAI LPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIMGGGSAYLSARRVMRADPALLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42272; Mature: 42141
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVIS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC SRDALESTMPYTFNRVQIDRLRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDN CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCC NLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSDHWAQVGNRREKVSGSFELG CCCHHHCCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECC PSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT CCCEECCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGY CHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PKLRVMSLIIRLGLVVSVLAILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GGGSAYLSARRVMRADPALLFS CCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GTTPFVLQHLRHQRKRSISAVSGITFACILIFLQLGFLDAVLMTATHLYSRLDFDLVIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC SRDALESTMPYTFNRVQIDRLRAIDGVARVAPLDIGYKQWKNPINGRNRALLVLGIDPDN CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCC NLTQFDSLSGDLSLLNHPETIFVDTKSRNDYGFKFFLNHSDHWAQVGNRREKVSGSFELG CCCHHHCCCCCHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECC PSLRYDGSILTGGQNFRRIFGSYSTDITSVGLLKLQPNSNIHMIKEKIESILPDKLLILT CCCEECCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE KDQVIERDKRYWLVSTSIGYVFGIGACMGLLVGIVIVGQIMNADVSTHLSIYATLLAIGY CHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PKLRVMSLIIRLGLVVSVLAILPSLAGAKVLYSLTNLATGLPMQLTLQRVITVSLLSLIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GGGSAYLSARRVMRADPALLFS CCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA