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The map label for this gene is crtI [H]

Identifier: 33863825

GI number: 33863825

Start: 1652534

End: 1653622

Strand: Reverse

Name: crtI [H]

Synonym: PMT1558

Alternate gene names: 33863825

Gene position: 1653622-1652534 (Counterclockwise)

Preceding gene: 33863828

Following gene: 33863824

Centisome position: 68.59

GC content: 41.51

Gene sequence:

>1089_bases
ATGCACGTGCTTGACCGCGATATTTTGTTGCCCTATTATGATGTCTTGGTAGTTGGCGCTGGGATTGGTGGACTAACAGC
AGCGGCACTTCTGGCTAAGCGTGGTTACAGAGTTTTGGTGGTAGAGCAGCATTATCTCCCTGGTGGATGCGCGAGTATCT
TTCGCCGTCAAGGGTTTACATTTGATGTAGGAGCTTCTCTCTTTTTTGGGTTTGGAGAAAAAGGCTATAACCCACATCAA
TTTGTGATGAATGAGTTGGAGGAAGACATTACTCTTGTGCCGATGGATGAAACCTTCACTATCCATCTAGATCAGCAAAC
CAAAGTTTCTATGTATACACAACGTGAAAGATTTTGGGCAGAAATGTGTTCTTGTTTTCCACACCAATCAGAACAAATCA
AAGCATTACTAAGTGAATTCGAATCTTTTTATAATGAGTCATTGGATAGCTATGGAGGTCAGTTTTTTGCGCCAGCGGAA
ACGCCACCGCAACATGGCATCAATTTGATGTTTACGCGACCTTTTTATTTAGCAAGGTTGCTTAATTATCTGCTTTCAAC
TCAAGAGCAACTATTTCGACGCTTCACACGTGATCCGCAGATTCTCAAACTATTTACGCTTTTAAATCAAAATATGACCA
CTTGTGGATTGGACCAGACACCTGCCATCGCCGGCCCAATGATCCACGTAGAATCTTACACAGGTGGTTGCTATTATGCT
CAAGGATCACCACAGACTCTGGCGAATAAGCTAGAAAAAGCTATTCATAAATATGGTGGAAAAATATTATATCGTAATCG
CATTGACAAGATCTTAATTAAGAATGGGAAGGCGATTGGCTGTCAGCTTGAAAATGGCCTTAAGATTAAATCTCATACAG
TAATCTCAAACACAACCGTCTGGAATCTCTATGGTAAGTTGATCGTTCGCAGCATATCTCCCGCAGAAAAAGAAAGTGGG
CAAGGAAATTTAGGCCAAGTTATAGTGTATTTGGTGTTTATCTTGGTGTTAAAGCAGAAGCTGTCCCCACGACGATTAAG
CCTACACAAATTCTGCCCTTTAATGACAATGGCTCTTCAAGTTATCTGA

Upstream 100 bases:

>100_bases
CATCTGTTGCCTGCAAGCTTCATGCAACGTTTTGCGCTTGTAGACTGAATGTTTCATGAAATAGTGAGATAATTTACTTG
GCTTGTGTATCCCTTAGCTA

Downstream 100 bases:

>100_bases
CAGTCTACGTCACGTCGATGTTGGATCCTGAAGCTTCTCCGCCAGGGACACATACACTCTGTATATTTCTACCGGAATCT
ACTCCAGAGATCACACTGCC

Product: NAD binding site

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MHVLDRDILLPYYDVLVVGAGIGGLTAAALLAKRGYRVLVVEQHYLPGGCASIFRRQGFTFDVGASLFFGFGEKGYNPHQ
FVMNELEEDITLVPMDETFTIHLDQQTKVSMYTQRERFWAEMCSCFPHQSEQIKALLSEFESFYNESLDSYGGQFFAPAE
TPPQHGINLMFTRPFYLARLLNYLLSTQEQLFRRFTRDPQILKLFTLLNQNMTTCGLDQTPAIAGPMIHVESYTGGCYYA
QGSPQTLANKLEKAIHKYGGKILYRNRIDKILIKNGKAIGCQLENGLKIKSHTVISNTTVWNLYGKLIVRSISPAEKESG
QGNLGQVIVYLVFILVLKQKLSPRRLSLHKFCPLMTMALQVI

Sequences:

>Translated_362_residues
MHVLDRDILLPYYDVLVVGAGIGGLTAAALLAKRGYRVLVVEQHYLPGGCASIFRRQGFTFDVGASLFFGFGEKGYNPHQ
FVMNELEEDITLVPMDETFTIHLDQQTKVSMYTQRERFWAEMCSCFPHQSEQIKALLSEFESFYNESLDSYGGQFFAPAE
TPPQHGINLMFTRPFYLARLLNYLLSTQEQLFRRFTRDPQILKLFTLLNQNMTTCGLDQTPAIAGPMIHVESYTGGCYYA
QGSPQTLANKLEKAIHKYGGKILYRNRIDKILIKNGKAIGCQLENGLKIKSHTVISNTTVWNLYGKLIVRSISPAEKESG
QGNLGQVIVYLVFILVLKQKLSPRRLSLHKFCPLMTMALQVI
>Mature_362_residues
MHVLDRDILLPYYDVLVVGAGIGGLTAAALLAKRGYRVLVVEQHYLPGGCASIFRRQGFTFDVGASLFFGFGEKGYNPHQ
FVMNELEEDITLVPMDETFTIHLDQQTKVSMYTQRERFWAEMCSCFPHQSEQIKALLSEFESFYNESLDSYGGQFFAPAE
TPPQHGINLMFTRPFYLARLLNYLLSTQEQLFRRFTRDPQILKLFTLLNQNMTTCGLDQTPAIAGPMIHVESYTGGCYYA
QGSPQTLANKLEKAIHKYGGKILYRNRIDKILIKNGKAIGCQLENGLKIKSHTVISNTTVWNLYGKLIVRSISPAEKESG
QGNLGQVIVYLVFILVLKQKLSPRRLSLHKFCPLMTMALQVI

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=307, Percent_Identity=26.3843648208469, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 40972; Mature: 40972

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLDRDILLPYYDVLVVGAGIGGLTAAALLAKRGYRVLVVEQHYLPGGCASIFRRQGFT
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC
FDVGASLFFGFGEKGYNPHQFVMNELEEDITLVPMDETFTIHLDQQTKVSMYTQRERFWA
EECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHH
EMCSCFPHQSEQIKALLSEFESFYNESLDSYGGQFFAPAETPPQHGINLMFTRPFYLARL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECHHHHHHH
LNYLLSTQEQLFRRFTRDPQILKLFTLLNQNMTTCGLDQTPAIAGPMIHVESYTGGCYYA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
QGSPQTLANKLEKAIHKYGGKILYRNRIDKILIKNGKAIGCQLENGLKIKSHTVISNTTV
CCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHEECCCCEEEEEECCCEEEEEEEEEECCHH
WNLYGKLIVRSISPAEKESGQGNLGQVIVYLVFILVLKQKLSPRRLSLHKFCPLMTMALQ
HHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VI
CC
>Mature Secondary Structure
MHVLDRDILLPYYDVLVVGAGIGGLTAAALLAKRGYRVLVVEQHYLPGGCASIFRRQGFT
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC
FDVGASLFFGFGEKGYNPHQFVMNELEEDITLVPMDETFTIHLDQQTKVSMYTQRERFWA
EECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHH
EMCSCFPHQSEQIKALLSEFESFYNESLDSYGGQFFAPAETPPQHGINLMFTRPFYLARL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECHHHHHHH
LNYLLSTQEQLFRRFTRDPQILKLFTLLNQNMTTCGLDQTPAIAGPMIHVESYTGGCYYA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
QGSPQTLANKLEKAIHKYGGKILYRNRIDKILIKNGKAIGCQLENGLKIKSHTVISNTTV
CCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHEECCCCEEEEEECCCEEEEEEEEEECCHH
WNLYGKLIVRSISPAEKESGQGNLGQVIVYLVFILVLKQKLSPRRLSLHKFCPLMTMALQ
HHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]