| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863765
Identifier: 33863765
GI number: 33863765
Start: 1581944
End: 1582324
Strand: Reverse
Name: 33863765
Synonym: PMT1498
Alternate gene names: NA
Gene position: 1582324-1581944 (Counterclockwise)
Preceding gene: 33863766
Following gene: 33863764
Centisome position: 65.63
GC content: 53.02
Gene sequence:
>381_bases TTGATTGATCCATCGGCAGCTTTTCAAGTTTCCGCCCAGCTTGATGAGCGGGCGAATGGATCGGAGCCGCTGCTTGGTGG ACAATTGCGTGAGAAGGCTGTCTGGGTTGATGAGGCTGTCTGCATTGGTTGTCGGTACTGCGCTCATGTAGCGACTAACA CCTTTGTTATCGAGCCAACAATGGGGCGCTCACGGGCCATCCGGCAGGACGGGGATAGTACGGAACGCATTCAGGAAGCC ATTGCGACCTGCCCGGTGAACTGCATCAAATGGGTGCAGTTTGAGCAGCTAGATGAATTGCGAGCTCAATTAGCAGCTCT GGAATTGCTTCCTCTTGGATTTCAAAGGACTTCTCGTAAGCGGCGTAATCATGGCTCCTAA
Upstream 100 bases:
>100_bases GCGCAGGAAGGCTTTGAGGTGGCAGAGCAGCGCAATACTGATGACGGCGCCATCGAACTGGTTGTCACTCGCTGGGATTC CTGATATCCAATCTTGACCA
Downstream 100 bases:
>100_bases GAGTTAATGAAGGCGTCTTTGGAGCAGAGCTCTCTGCCTTGCCGCCGCTTTGGCCGCACCGGTTTATCAATGCCTGTGTT GTCTTTAGGGGGGATGCGCT
Product: 3Fe-4S ferredoxin
Products: NA
Alternate protein names: 3Fe-4S Ferredoxin; Ferredoxin-Like Protein; Ferredoxin 4Fe-4S Type; Ferrodoxin I
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MIDPSAAFQVSAQLDERANGSEPLLGGQLREKAVWVDEAVCIGCRYCAHVATNTFVIEPTMGRSRAIRQDGDSTERIQEA IATCPVNCIKWVQFEQLDELRAQLAALELLPLGFQRTSRKRRNHGS
Sequences:
>Translated_126_residues MIDPSAAFQVSAQLDERANGSEPLLGGQLREKAVWVDEAVCIGCRYCAHVATNTFVIEPTMGRSRAIRQDGDSTERIQEA IATCPVNCIKWVQFEQLDELRAQLAALELLPLGFQRTSRKRRNHGS >Mature_126_residues MIDPSAAFQVSAQLDERANGSEPLLGGQLREKAVWVDEAVCIGCRYCAHVATNTFVIEPTMGRSRAIRQDGDSTERIQEA IATCPVNCIKWVQFEQLDELRAQLAALELLPLGFQRTSRKRRNHGS
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14028; Mature: 14028
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPSAAFQVSAQLDERANGSEPLLGGQLREKAVWVDEAVCIGCRYCAHVATNTFVIEPT CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC MGRSRAIRQDGDSTERIQEAIATCPVNCIKWVQFEQLDELRAQLAALELLPLGFQRTSRK CCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RRNHGS HCCCCC >Mature Secondary Structure MIDPSAAFQVSAQLDERANGSEPLLGGQLREKAVWVDEAVCIGCRYCAHVATNTFVIEPT CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC MGRSRAIRQDGDSTERIQEAIATCPVNCIKWVQFEQLDELRAQLAALELLPLGFQRTSRK CCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RRNHGS HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA