| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is gluQ [H]
Identifier: 33863661
GI number: 33863661
Start: 1480254
End: 1481174
Strand: Reverse
Name: gluQ [H]
Synonym: PMT1394
Alternate gene names: 33863661
Gene position: 1481174-1480254 (Counterclockwise)
Preceding gene: 33863662
Following gene: 33863660
Centisome position: 61.44
GC content: 57.0
Gene sequence:
>921_bases ATGGCCAAGTCCTCTGCACTGCCTGATCATCTGTATGAGCAGATGGAAGTGGGGCAGCGCCTTAGGAATCAGGGCTATCG GGGCCGGTTTGCCCCGTCTCCGACCGGACCATTACACCTGGGCAATCTGTGCACTGCTCTGGTGTCTTGGTTGCAAGCGC GCTTGGCTAATGGGGCTTGGCTGTTGCGGGTGGATGACCTGGATCAGCCTCGCAATCGTGTGGGAGCGGTTGAGAGCCTC CAGCAGGATTTGCACTGGCTAGGCCTTGAGTGGGATGGCCCCGTGGTGTTTCAGAGCCGCCGCCGTGGGATTTACAACTC TTTCCTCTCGGCTCTGCGGCGTCAGGGGAAGTTGTATGCCTGTCGATGTAGCCGGCGAATGTTGGCTGACATCTCAGCAC CAGCTGGGCGGCACTTGGTTTACCCAGGCACGTGTCGAGATCTGGAGCTGTTTTGGGGGTGGCATGAGGGCAGGCTGCCC AGTTGGCGTTTAAGGGTGAGCAAAGAGTTCTCCCATACCAGTGGGGATGTGATTTTGCGGCGCGCTGATGGTTTTATCGC TTATCACTTGGCGACGGTTGTTGATGAACTGACTCTCGGGATTAGCGAGGTGGTACGCGGTGAAGACTTGCTTGACGCCA TGAATGCACAGCTCGCTTTGATCAATGCGATTTCAGAGCGGCCTGTGATCTATCGCCACGTGCCGTTGTTGTGTGATGAC CAAGGCCGCAAGTTGGCCAAGCGCGAGGGACATGCTGGTTTGGACAGCCTGCGTTCCGAGGGACTGGGGCCTTCTCATGT GGTGGGCTGGCTGGCTGCTAGCCAGAGCCTTGTTCCTTTTGGTGCTGAACTCACGGCAGGGGAGTTATTGAGTGAGTTGA AGAAGAAGGAGGGGGTTTTGAAAAGCGTGCTGAAACCTTAA
Upstream 100 bases:
>100_bases GTTCAGGGCTGATTTTTTAGCCTTTGTTTGCAGACGGGCGGTCGTCACGGCCGCCTTTTATTTGTGGGCCTACTGAGCCA GGGCTCCTTCCATTGATTCA
Downstream 100 bases:
>100_bases AGGAGCAACGGCTCTAATTCTTAACGAAGCCTTCGGGATCACAAGCGCAAAAATGTATGAAAATAAAAAGCCACATAATG CACACAATCAATGTCGATCT
Product: glutamyl/glutaminyl-tRNA synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAKSSALPDHLYEQMEVGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESL QQDLHWLGLEWDGPVVFQSRRRGIYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLP SWRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLDAMNAQLALINAISERPVIYRHVPLLCDD QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP
Sequences:
>Translated_306_residues MAKSSALPDHLYEQMEVGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESL QQDLHWLGLEWDGPVVFQSRRRGIYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLP SWRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLDAMNAQLALINAISERPVIYRHVPLLCDD QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP >Mature_305_residues AKSSALPDHLYEQMEVGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESLQ QDLHWLGLEWDGPVVFQSRRRGIYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPS WRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLDAMNAQLALINAISERPVIYRHVPLLCDDQ GRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=312, Percent_Identity=33.0128205128205, Blast_Score=138, Evalue=6e-33, Organism=Escherichia coli, GI226510925, Length=260, Percent_Identity=36.5384615384615, Blast_Score=150, Evalue=7e-38, Organism=Escherichia coli, GI1788743, Length=261, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324540, Length=274, Percent_Identity=34.3065693430657, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI24665321, Length=278, Percent_Identity=35.9712230215827, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 34098; Mature: 33966
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSSALPDHLYEQMEVGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAW CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE LLRVDDLDQPRNRVGAVESLQQDLHWLGLEWDGPVVFQSRRRGIYNSFLSALRRQGKLYA EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCEEE CRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPSWRLRVSKEFSHTSGDVILR EHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCEEEE RADGFIAYHLATVVDELTLGISEVVRGEDLLDAMNAQLALINAISERPVIYRHVPLLCDD ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECC QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVL CCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KSVLKP HHHCCC >Mature Secondary Structure AKSSALPDHLYEQMEVGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAW CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE LLRVDDLDQPRNRVGAVESLQQDLHWLGLEWDGPVVFQSRRRGIYNSFLSALRRQGKLYA EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCEEE CRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPSWRLRVSKEFSHTSGDVILR EHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCEEEE RADGFIAYHLATVVDELTLGISEVVRGEDLLDAMNAQLALINAISERPVIYRHVPLLCDD ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECC QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVL CCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KSVLKP HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA