| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is yfbI [C]
Identifier: 33863630
GI number: 33863630
Start: 1448943
End: 1450784
Strand: Reverse
Name: yfbI [C]
Synonym: PMT1363
Alternate gene names: 33863630
Gene position: 1450784-1448943 (Counterclockwise)
Preceding gene: 33863631
Following gene: 33863628
Centisome position: 60.18
GC content: 55.7
Gene sequence:
>1842_bases ATGGTGCTGACGTTTGCTGCGACGGTGTTGCTGTCTCCTCTTCAACGGCGTCGAGGCCTGCTGCTGATCCTGGCGTTTGG GGTAGCTCTCTGCCTTTGGCAGTTAGGAGACTCTGGTTTGGTTGATGAAACCCCGCCTCTCTTTGCCGCGGCAGGTCGTG CCATGAGTACTACAGGAGATTGGCTGACGCCGAGGGTTAATGGTCTGCCTCGCTTCGACAAGCCTCCTCTGGTGTATTGG CTAATGGGGTTGGTTTATGCCTTGCCCGGCCATGAGGTTTGGGACCCATTAGGGACATGGGCGGCACGTCTTCCTTCTGC TCTTGCATCTGTCTTGATGATGCTGGCCCTTGGTGACACTGTGATGTGTTGGCCCCAGAAGGATGACGCTTGTCCACGCC GAACAGGTGTTGCGGTGGCCTTGGCCTTTGCTCTTTCGCCACTGGTTATGGTCTGGAGTCGGGTTGCTGTTAGCGATGCC TTGTTTTGCAGCACCTTGGGGGTGAGTTTGCTTCTGCAGTGGCGCCGCTTTGCTGCCCCGAGTACCCAGCCATGGTGGTT GGCCTGGCTTGTTTTGGGTTTAGCAGTGCTGACCAAAGGACCAGCGGCTGTCGTGCTGACTGGCATGGTGCTTGTTCTAT TTGCTTTGCTGCAGTGGAATCTGGCCAGCCTTTGGCAGCGGTTGCGCCCTCTGCCTGGTTTGTTGATTACTGCCCTGATC AGCCTGCCTTGGTATGTGGCGGAATTGCTTGTGGAGGGACAACCTTTTTGGGATAGCTTCTTCGGCTATCACAACCTTCA ACGCTTCACATCAGTAGTCAATAGTCACCTGCAGCCTTGGTGGTTTTTCGGGCCTGTCTTGGTGGTTGCGTCCCTGCCAT TTACCCCCTTGCTGATCCTTGGGCTGTTGCAGGCCTTCGTTCCAGTCAGGAAGGGCGGTGCGCTTTGCCAGACAGAGCCT GAGGGATCTCTGCAGAGTTTTGCGGCCTGTTGGCTGCTAGCTGTGTTGCTTCTATTCACTTGCGCTGCCACAAAATTGCC AAGTTATTGGTTGCCTGCGACACCGGCGGCCGCGTTGTTGATTGGATTGGCCGCAAGTGTTTCCCCTCAACAGCGACCAG GTCTTGTTTGGGCATGGGGCGGATCAGTTGTTTTGGCGGGATTGTTAGCGGCAGGGCTGTGGGCTTCACCGTTCTGGGTT GAATGGATTTATGACCCGGAGATGCCCACCCTTGCGGCAGAACTGCTGGCTAGTCGTCTTGTACTCAGGGCAGCAGTTTT TTGCAGTCTTTCGGTGCTACTTGGGATCTGGTTGGCTTGGCGGCCACGGCCTGGGCGATTGCTGGCCCTTCAAGGGCCAT TGGTTGCTTTCCAATTGTTTTCGTTCTTACCGATGTGGGCGTTGGGTGACAAGGTGCGCCAGTTGCCTGTAAGGCAAGTT GCTCATCTGTTGGTCGCTTCTCAGAAGTCTCGAGAACCCTTGGTGATGGTTGGGGCAATCAAACCTTCCCTTCACTTCTA CACCGATCAGGTGGTGGTTTATGAGGGGCGCTCTGCGGGGGCGTTAGTGAACCTGGATGATCGATTACGAGAAGAAGAGC GCAGTGGATGGTCAGGTCTGCCTATTGAGGGGCCCATGGGATCTTCAACCGCTCTCGTGGTGATTGATCAGGGCACAACG CAGCGGAGGCATTGGCAGGACCTTCAACCTGAGCTGCTTGGCAAGTTCGGGATCTATAGGGTTTGGCGGTTGGATCGTCG GACTCTTGAGAAGCGAGCGAATCAGCTCAAATCTGAAGGGTTCCAAACTGATTGGCGGCAACCACGACCTGAGCGTTTCT GA
Upstream 100 bases:
>100_bases GCTTGGATGGAGATGGTCCACTCTGCTGGCCTGCCCCTATGGCACTTCTGAAGATATTGGGTCTGCTCAGGAACATAGCC AGGAATGCCACCATCACTAG
Downstream 100 bases:
>100_bases TGTTTTGGTTGTCTTCATTGCAGGATGAAGTGGGTGCTTCGGCCTGCTCTTGTCATTTGCTTTTGGACCACCATGCGAGC AAGACGTCTTGCATGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MVLTFAATVLLSPLQRRRGLLLILAFGVALCLWQLGDSGLVDETPPLFAAAGRAMSTTGDWLTPRVNGLPRFDKPPLVYW LMGLVYALPGHEVWDPLGTWAARLPSALASVLMMLALGDTVMCWPQKDDACPRRTGVAVALAFALSPLVMVWSRVAVSDA LFCSTLGVSLLLQWRRFAAPSTQPWWLAWLVLGLAVLTKGPAAVVLTGMVLVLFALLQWNLASLWQRLRPLPGLLITALI SLPWYVAELLVEGQPFWDSFFGYHNLQRFTSVVNSHLQPWWFFGPVLVVASLPFTPLLILGLLQAFVPVRKGGALCQTEP EGSLQSFAACWLLAVLLLFTCAATKLPSYWLPATPAAALLIGLAASVSPQQRPGLVWAWGGSVVLAGLLAAGLWASPFWV EWIYDPEMPTLAAELLASRLVLRAAVFCSLSVLLGIWLAWRPRPGRLLALQGPLVAFQLFSFLPMWALGDKVRQLPVRQV AHLLVASQKSREPLVMVGAIKPSLHFYTDQVVVYEGRSAGALVNLDDRLREEERSGWSGLPIEGPMGSSTALVVIDQGTT QRRHWQDLQPELLGKFGIYRVWRLDRRTLEKRANQLKSEGFQTDWRQPRPERF
Sequences:
>Translated_613_residues MVLTFAATVLLSPLQRRRGLLLILAFGVALCLWQLGDSGLVDETPPLFAAAGRAMSTTGDWLTPRVNGLPRFDKPPLVYW LMGLVYALPGHEVWDPLGTWAARLPSALASVLMMLALGDTVMCWPQKDDACPRRTGVAVALAFALSPLVMVWSRVAVSDA LFCSTLGVSLLLQWRRFAAPSTQPWWLAWLVLGLAVLTKGPAAVVLTGMVLVLFALLQWNLASLWQRLRPLPGLLITALI SLPWYVAELLVEGQPFWDSFFGYHNLQRFTSVVNSHLQPWWFFGPVLVVASLPFTPLLILGLLQAFVPVRKGGALCQTEP EGSLQSFAACWLLAVLLLFTCAATKLPSYWLPATPAAALLIGLAASVSPQQRPGLVWAWGGSVVLAGLLAAGLWASPFWV EWIYDPEMPTLAAELLASRLVLRAAVFCSLSVLLGIWLAWRPRPGRLLALQGPLVAFQLFSFLPMWALGDKVRQLPVRQV AHLLVASQKSREPLVMVGAIKPSLHFYTDQVVVYEGRSAGALVNLDDRLREEERSGWSGLPIEGPMGSSTALVVIDQGTT QRRHWQDLQPELLGKFGIYRVWRLDRRTLEKRANQLKSEGFQTDWRQPRPERF >Mature_613_residues MVLTFAATVLLSPLQRRRGLLLILAFGVALCLWQLGDSGLVDETPPLFAAAGRAMSTTGDWLTPRVNGLPRFDKPPLVYW LMGLVYALPGHEVWDPLGTWAARLPSALASVLMMLALGDTVMCWPQKDDACPRRTGVAVALAFALSPLVMVWSRVAVSDA LFCSTLGVSLLLQWRRFAAPSTQPWWLAWLVLGLAVLTKGPAAVVLTGMVLVLFALLQWNLASLWQRLRPLPGLLITALI SLPWYVAELLVEGQPFWDSFFGYHNLQRFTSVVNSHLQPWWFFGPVLVVASLPFTPLLILGLLQAFVPVRKGGALCQTEP EGSLQSFAACWLLAVLLLFTCAATKLPSYWLPATPAAALLIGLAASVSPQQRPGLVWAWGGSVVLAGLLAAGLWASPFWV EWIYDPEMPTLAAELLASRLVLRAAVFCSLSVLLGIWLAWRPRPGRLLALQGPLVAFQLFSFLPMWALGDKVRQLPVRQV AHLLVASQKSREPLVMVGAIKPSLHFYTDQVVVYEGRSAGALVNLDDRLREEERSGWSGLPIEGPMGSSTALVVIDQGTT QRRHWQDLQPELLGKFGIYRVWRLDRRTLEKRANQLKSEGFQTDWRQPRPERF
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=343, Percent_Identity=25.3644314868805, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 67805; Mature: 67805
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTFAATVLLSPLQRRRGLLLILAFGVALCLWQLGDSGLVDETPPLFAAAGRAMSTTGD CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC WLTPRVNGLPRFDKPPLVYWLMGLVYALPGHEVWDPLGTWAARLPSALASVLMMLALGDT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VMCWPQKDDACPRRTGVAVALAFALSPLVMVWSRVAVSDALFCSTLGVSLLLQWRRFAAP EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STQPWWLAWLVLGLAVLTKGPAAVVLTGMVLVLFALLQWNLASLWQRLRPLPGLLITALI CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH SLPWYVAELLVEGQPFWDSFFGYHNLQRFTSVVNSHLQPWWFFGPVLVVASLPFTPLLIL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH GLLQAFVPVRKGGALCQTEPEGSLQSFAACWLLAVLLLFTCAATKLPSYWLPATPAAALL HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH IGLAASVSPQQRPGLVWAWGGSVVLAGLLAAGLWASPFWVEWIYDPEMPTLAAELLASRL HHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH VLRAAVFCSLSVLLGIWLAWRPRPGRLLALQGPLVAFQLFSFLPMWALGDKVRQLPVRQV HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHH AHLLVASQKSREPLVMVGAIKPSLHFYTDQVVVYEGRSAGALVNLDDRLREEERSGWSGL HHHHHHCCCCCCCEEEEEEECCCCEEEECEEEEEECCCCCEEECCHHHHHHHHHCCCCCC PIEGPMGSSTALVVIDQGTTQRRHWQDLQPELLGKFGIYRVWRLDRRTLEKRANQLKSEG CCCCCCCCCCEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FQTDWRQPRPERF CCCCCCCCCCCCC >Mature Secondary Structure MVLTFAATVLLSPLQRRRGLLLILAFGVALCLWQLGDSGLVDETPPLFAAAGRAMSTTGD CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC WLTPRVNGLPRFDKPPLVYWLMGLVYALPGHEVWDPLGTWAARLPSALASVLMMLALGDT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VMCWPQKDDACPRRTGVAVALAFALSPLVMVWSRVAVSDALFCSTLGVSLLLQWRRFAAP EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STQPWWLAWLVLGLAVLTKGPAAVVLTGMVLVLFALLQWNLASLWQRLRPLPGLLITALI CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH SLPWYVAELLVEGQPFWDSFFGYHNLQRFTSVVNSHLQPWWFFGPVLVVASLPFTPLLIL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH GLLQAFVPVRKGGALCQTEPEGSLQSFAACWLLAVLLLFTCAATKLPSYWLPATPAAALL HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH IGLAASVSPQQRPGLVWAWGGSVVLAGLLAAGLWASPFWVEWIYDPEMPTLAAELLASRL HHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH VLRAAVFCSLSVLLGIWLAWRPRPGRLLALQGPLVAFQLFSFLPMWALGDKVRQLPVRQV HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHH AHLLVASQKSREPLVMVGAIKPSLHFYTDQVVVYEGRSAGALVNLDDRLREEERSGWSGL HHHHHHCCCCCCCEEEEEEECCCCEEEECEEEEEECCCCCEEECCHHHHHHHHHCCCCCC PIEGPMGSSTALVVIDQGTTQRRHWQDLQPELLGKFGIYRVWRLDRRTLEKRANQLKSEG CCCCCCCCCCEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FQTDWRQPRPERF CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]