| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863612
Identifier: 33863612
GI number: 33863612
Start: 1430359
End: 1430949
Strand: Reverse
Name: 33863612
Synonym: PMT1345
Alternate gene names: NA
Gene position: 1430949-1430359 (Counterclockwise)
Preceding gene: 33863613
Following gene: 33863607
Centisome position: 59.35
GC content: 50.42
Gene sequence:
>591_bases ATGACCGTTGATGAACGTCAGGATTCTTTGGTCACTTTCAAGGCCTTTGCGATTGCTGAAGGCATTGTGTTGATTGTTCT TGGTGTGTTGGCTTTGATCTTTCCGGTGGTTGCTGCAAGTTGGACGACCGGGTTGATTGCTGTGTTGTTTTTGGTGGGCG GCATCGTTGGCTGGATTAGCAACCTTGCGCGCTCTTCCCGTATGGCCCGTTGGGTTTGTTTTTGGCGTCTAGTGCTATCA ACACTGTTCTTGGTAGCAGGCGCATCGATGATCTCCTATATGAAGAACCCTGCTGAAGCAGCTGTTCAGGTGGCGACATT TGCCTTGGCGATTGGCATCGTGTTTTTGGCAGAGGGTATCGTTGCTTTCTGTACTGGACTGGCGCACGCAAAACGCGCTG GGTCTGGTTGGGCAATTGCCAATGGGGTGATCACTTTTATTCTTGGCTTGTTGATTGTGACAATGAAGTTTTGGCAGCTG TTGTGGGTACTCGGAGTATTGGTGGGAATCAGCTTTCTGTTTAGCGGCATTGACTTGATTGCCTTTAGCTCAACCCTGCA CGACGACAACCAGCCCCCTGCTCTCACCTGA
Upstream 100 bases:
>100_bases GGAGCTGAGTCGCTACGTCTTTTGCACAGGGATCTTACAAAGCATGGCCGGATCAGGAGACCCTCAATAGCGTTCAGATG CTGTTCATTTTGAACATTTC
Downstream 100 bases:
>100_bases AATGGCTAAAAAAGATCTATTTAGTTGTGCCAATTGCTAATTTTTGGGTGTCCCTAAGGCGATGTTGATGATGGAGAGGC CAAAACATTAAGGAAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTVDERQDSLVTFKAFAIAEGIVLIVLGVLALIFPVVAASWTTGLIAVLFLVGGIVGWISNLARSSRMARWVCFWRLVLS TLFLVAGASMISYMKNPAEAAVQVATFALAIGIVFLAEGIVAFCTGLAHAKRAGSGWAIANGVITFILGLLIVTMKFWQL LWVLGVLVGISFLFSGIDLIAFSSTLHDDNQPPALT
Sequences:
>Translated_196_residues MTVDERQDSLVTFKAFAIAEGIVLIVLGVLALIFPVVAASWTTGLIAVLFLVGGIVGWISNLARSSRMARWVCFWRLVLS TLFLVAGASMISYMKNPAEAAVQVATFALAIGIVFLAEGIVAFCTGLAHAKRAGSGWAIANGVITFILGLLIVTMKFWQL LWVLGVLVGISFLFSGIDLIAFSSTLHDDNQPPALT >Mature_195_residues TVDERQDSLVTFKAFAIAEGIVLIVLGVLALIFPVVAASWTTGLIAVLFLVGGIVGWISNLARSSRMARWVCFWRLVLST LFLVAGASMISYMKNPAEAAVQVATFALAIGIVFLAEGIVAFCTGLAHAKRAGSGWAIANGVITFILGLLIVTMKFWQLL WVLGVLVGISFLFSGIDLIAFSSTLHDDNQPPALT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20916; Mature: 20785
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDERQDSLVTFKAFAIAEGIVLIVLGVLALIFPVVAASWTTGLIAVLFLVGGIVGWIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLARSSRMARWVCFWRLVLSTLFLVAGASMISYMKNPAEAAVQVATFALAIGIVFLAEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAFCTGLAHAKRAGSGWAIANGVITFILGLLIVTMKFWQLLWVLGVLVGISFLFSGIDLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSSTLHDDNQPPALT HHHHHHCCCCCCCCCC >Mature Secondary Structure TVDERQDSLVTFKAFAIAEGIVLIVLGVLALIFPVVAASWTTGLIAVLFLVGGIVGWIS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLARSSRMARWVCFWRLVLSTLFLVAGASMISYMKNPAEAAVQVATFALAIGIVFLAEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAFCTGLAHAKRAGSGWAIANGVITFILGLLIVTMKFWQLLWVLGVLVGISFLFSGIDLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSSTLHDDNQPPALT HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA