| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is nanE [H]
Identifier: 33863602
GI number: 33863602
Start: 1421463
End: 1422155
Strand: Reverse
Name: nanE [H]
Synonym: PMT1335
Alternate gene names: 33863602
Gene position: 1422155-1421463 (Counterclockwise)
Preceding gene: 33863603
Following gene: 33863597
Centisome position: 58.99
GC content: 53.39
Gene sequence:
>693_bases ATGTCTTTGCCTGCTTTTGAAACTCTCAGACGGGGGTTGATTGTCTCTGTTCAGGCGCCTGAGGGTTCACCGATGCGTCA TCCTCAGGTGATTGCGGCCATGGCTGAAACCAGTCTTTGCAATGGCGCGGTTGGGGTGCGTTTGGAAAGTCCGGAACACA TTGGTGCTGTTCGACGCCGTTGTCCGAACGCCTTGATTATTGGGCTTTGGAAGCGTTCCTTCCCTGATAGTGCTGTCTAC ATCACGCCAGGATGGGAGGAAGTTCAGGCTGTCTGGTCGGCGGGAGCAGATGTAGTCGCTCTCGATGCTACTCAGCGTCA TCGGCCAGGGGGGATCACTCTTGATCAGCTGGTGAGTCGGGTTCGAGAAGATTTGGGAGCTCCTCTGATGGCAGATGTCG ATACGATCGAGAATGGTTTACGTGCAGCAGAGCTTGGTTGCAGCTTTGTGGGCACCACTCTTTATGGCTATACCGAAGTA ACTGCTGTTAAGCGGCCTCCAGGTTTGTGTTTGTTGGGGCAGTTGCGGCAGCAACTTGATTCAGATGTCAAGCTCATCTG CGAAGGCGGGCTTGATTCTCCTCAGATAGCACTAGAAGCACTTTCTTCAGGTGCAGACATGGTGGTAGTCGGTACAGCGA TTACCGGTGTCGACTTGCAGGTGGAAAACTATTGCCGAACATTGGCGGCTTGA
Upstream 100 bases:
>100_bases ACTCGTTGTTAGTACTACCTTCCCCTGCTTTTGCTCTAAACCATTTGCCGCATCATTGCTCGCTAATCACGAATGCAGAG TTCTTGAAGGCATCCTGAGC
Downstream 100 bases:
>100_bases CTTCCACAGCGTTTTGGCATCAACCGAATTGTGGGACGTGACTTGTCGAGGCAGAGCCACAACGCATGAGACTTGTCCAT GCGTTGTGCCGGTGTTCTTT
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAETSLCNGAVGVRLESPEHIGAVRRRCPNALIIGLWKRSFPDSAVY ITPGWEEVQAVWSAGADVVALDATQRHRPGGITLDQLVSRVREDLGAPLMADVDTIENGLRAAELGCSFVGTTLYGYTEV TAVKRPPGLCLLGQLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA
Sequences:
>Translated_230_residues MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAETSLCNGAVGVRLESPEHIGAVRRRCPNALIIGLWKRSFPDSAVY ITPGWEEVQAVWSAGADVVALDATQRHRPGGITLDQLVSRVREDLGAPLMADVDTIENGLRAAELGCSFVGTTLYGYTEV TAVKRPPGLCLLGQLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA >Mature_229_residues SLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAETSLCNGAVGVRLESPEHIGAVRRRCPNALIIGLWKRSFPDSAVYI TPGWEEVQAVWSAGADVVALDATQRHRPGGITLDQLVSRVREDLGAPLMADVDTIENGLRAAELGCSFVGTTLYGYTEVT AVKRPPGLCLLGQLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=215, Percent_Identity=38.1395348837209, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 24462; Mature: 24331
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAETSLCNGAVGVRLESPEHIGAVRRR CCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH CPNALIIGLWKRSFPDSAVYITPGWEEVQAVWSAGADVVALDATQRHRPGGITLDQLVSR CCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHH VREDLGAPLMADVDTIENGLRAAELGCSFVGTTLYGYTEVTAVKRPPGLCLLGQLRQQLD HHHHHCCCCEECHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEHHHHHHHHHC SDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEHHHHHHHHCC >Mature Secondary Structure SLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAETSLCNGAVGVRLESPEHIGAVRRR CCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH CPNALIIGLWKRSFPDSAVYITPGWEEVQAVWSAGADVVALDATQRHRPGGITLDQLVSR CCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHH VREDLGAPLMADVDTIENGLRAAELGCSFVGTTLYGYTEVTAVKRPPGLCLLGQLRQQLD HHHHHCCCCEECHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEHHHHHHHHHC SDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA