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The map label for this gene is ldcA [C]

Identifier: 33863596

GI number: 33863596

Start: 1414100

End: 1414999

Strand: Direct

Name: ldcA [C]

Synonym: PMT1329

Alternate gene names: 33863596

Gene position: 1414100-1414999 (Clockwise)

Preceding gene: 33863595

Following gene: 33863598

Centisome position: 58.66

GC content: 58.33

Gene sequence:

>900_bases
ATGGTGCAGCTCCGATCTAACCTGCTCACACCAGCGCTTCAACGTGGCGACGAGGTGGTCACAGTGGCTGCGAGTTCAGC
GCTGGATGATGAACAATCACTGCTCGAAGGCCTCAAAGTCCTTGAAGGGTGGGGATTAGTCTGCCGGCCTCAGCAAGTGA
GTGAACGCCGCTGGGGCTACCTAGCGGGCAAAGATGCCAGCCGCCAGCGCGATCTAAATTCTGAGTCCCCTGCTGCTCTG
TTGGCTTGTGCTCGCGGCGGCTGGGGAGCTGCACGTTTACTGGAACACAAGCAAACCTGGCAGCCAGGCTGGCTAATGGG
GTTTTCAGATGTCACCGCCCTGCTCTGGGCACGTCTGGCGGCCGGGTTCGACGGCTGCGTGCATGGCCCCTTACTCACCA
CACTTGCCAAGGAACCCGCCTGGAGCAAAGCCCGACTGCATGATCTTCTCTTCGGCAAACACATCCCAGACCTTGAAGGG
CAGCCCTGGATGGGTGGAGTAGCTAGCGGGCCCTTGCTGGTCGCCAATCTCACTGTGGCCTCCCATTTGCTAGGCAGTAG
CCATGTACCCGATCTCAAGGGTGCAATCTTGATCCTGGAAGATGTTGAGGAAGCGCCCTATCGCATCGACCGCATGCTGA
CCCACTGGCGCCTCGCAGGCCTACTACAAAGACTGGCCGGCCTCGGATTCGGCAGCTTTAAGGGGTGTGAAGCACCTGAA
CAGATTCCCGGGGATCAAACCTTCCAACTTGAGGAAGTATTAAAAGAACGCAGTACTGATCTCGGAATTCCTGTCGTCGG
CCAACTCCCAGTTGGTCATTGCTGCGGCAATGCTGCCTTACCACTTGGACGACAAGCCCAGCTTGACGGCAGCCATGGCC
GGCTCAGCTTGCTGTGCTAA

Upstream 100 bases:

>100_bases
CAATCAACCAATTACGACCTACGGGCAGCACTTTCAGCATCAAGTTCTGCTAGGCGCAATGTTGCTGCTCGGCTTGATCC
TGGGGCGCATCAGCTGAATC

Downstream 100 bases:

>100_bases
CAGCCTCAACCATCGTTCTCACCAGGCCAAAGTCTTCCTCCCCGTGGTTTGTCATCTCCGGTATTAATTGATGAGGTTCT
GGGTGCTAAGCCCTAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVQLRSNLLTPALQRGDEVVTVAASSALDDEQSLLEGLKVLEGWGLVCRPQQVSERRWGYLAGKDASRQRDLNSESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSKARLHDLLFGKHIPDLEG
QPWMGGVASGPLLVANLTVASHLLGSSHVPDLKGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKGCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGQLPVGHCCGNAALPLGRQAQLDGSHGRLSLLC

Sequences:

>Translated_299_residues
MVQLRSNLLTPALQRGDEVVTVAASSALDDEQSLLEGLKVLEGWGLVCRPQQVSERRWGYLAGKDASRQRDLNSESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSKARLHDLLFGKHIPDLEG
QPWMGGVASGPLLVANLTVASHLLGSSHVPDLKGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKGCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGQLPVGHCCGNAALPLGRQAQLDGSHGRLSLLC
>Mature_299_residues
MVQLRSNLLTPALQRGDEVVTVAASSALDDEQSLLEGLKVLEGWGLVCRPQQVSERRWGYLAGKDASRQRDLNSESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSKARLHDLLFGKHIPDLEG
QPWMGGVASGPLLVANLTVASHLLGSSHVPDLKGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKGCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGQLPVGHCCGNAALPLGRQAQLDGSHGRLSLLC

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=286, Percent_Identity=29.3706293706294, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32216; Mature: 32216

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLRSNLLTPALQRGDEVVTVAASSALDDEQSLLEGLKVLEGWGLVCRPQQVSERRWGY
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHCCE
LAGKDASRQRDLNSESPAALLACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLA
ECCCCCHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHH
AGFDGCVHGPLLTTLAKEPAWSKARLHDLLFGKHIPDLEGQPWMGGVASGPLLVANLTVA
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHH
SHLLGSSHVPDLKGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKGCEAPE
HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QIPGDQTFQLEEVLKERSTDLGIPVVGQLPVGHCCGNAALPLGRQAQLDGSHGRLSLLC
HCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MVQLRSNLLTPALQRGDEVVTVAASSALDDEQSLLEGLKVLEGWGLVCRPQQVSERRWGY
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHCCE
LAGKDASRQRDLNSESPAALLACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLA
ECCCCCHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHH
AGFDGCVHGPLLTTLAKEPAWSKARLHDLLFGKHIPDLEGQPWMGGVASGPLLVANLTVA
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHH
SHLLGSSHVPDLKGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKGCEAPE
HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QIPGDQTFQLEEVLKERSTDLGIPVVGQLPVGHCCGNAALPLGRQAQLDGSHGRLSLLC
HCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]