Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863593

Identifier: 33863593

GI number: 33863593

Start: 1410546

End: 1411256

Strand: Direct

Name: 33863593

Synonym: PMT1326

Alternate gene names: NA

Gene position: 1410546-1411256 (Clockwise)

Preceding gene: 33863592

Following gene: 33863595

Centisome position: 58.51

GC content: 48.52

Gene sequence:

>711_bases
ATGCCGGAGCACCCTCAGGACTTCTTGAGTGACCAATCCCACTCAGAGCAACTCTCCACACCATTGATTCAAGTTGGCGC
GTTGCTTAGAGAAGCCCGCGAAAAACGGGGGTTCTCAATAGCAGAAATTGCGGGAAGTCTTCGAATAGGCAAAGAGCAAC
TAATAGCCCTGGAGAATGGAAACAAAGACCTACTACCTGAGCCGGTTTTTATTAGAGCCATGGTGCGCCGGGTCGCCGAG
CGACTCAACCTGGATGCGACTGCCCTTGTGCAGCAAATTCAGGTCATCATTCCATCAAACTCCGAAGCCCTACGCCAATC
AAAGAGCAAAGCGTCTCGTCCAAACCTAAAAGTGATACCTGCATTGGCCTTTTTGGGAGGGTTGATTGGATTGACTGCAG
CAGGACTAGGCATCACCTATTACAGCAACCCCAACACCTTTACCCGCATCCAAACAAGCATCAACAACGCAATCATTTCA
ATCAACGACACCGCCGAAGACATGATCTTTGGGTCTTCAACTCGTTCAAATGATGTAAAAGATGAGCCTAAGGACACCGA
CCTAATCTCTCAGCCTGCAGATGCAGCACCTAGCCAAAATTTGCCATCAACATCTCCATCAGGGCTAAAAAAACCAAATA
ATAATAATCAACCAGCTTCAACTGAACAGCCAAAAACGCAGCCAGGCAGCAACCCTAACCCCCAACAGTGA

Upstream 100 bases:

>100_bases
AAACCAGGTGATCCCATATACATGGGGACAAATGATGCCTGACAAGCTCAGTGCTTCCAACTAAGGTCAAATGCATGCAG
GTCAACACTCCTCTTCCTTA

Downstream 100 bases:

>100_bases
GGCTGAGATTATTTTTGAAGGCGACCTTAGCGAGCCGTTCAGCTATCCACTAGAGCAAGGCCTAGAAATCTATGCAGGGC
ATCCTGATCTGATTCATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE
RLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIIS
INDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ

Sequences:

>Translated_236_residues
MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE
RLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIIS
INDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ
>Mature_235_residues
PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAER
LNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISI
NDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25483; Mature: 25352

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC
NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIP
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
ALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISINDTAEDMIFGSSTRSNDVK
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEEECCCHHHHEECCCCCCCCCC
DEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC
NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIP
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
ALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISINDTAEDMIFGSSTRSNDVK
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEEECCCHHHHEECCCCCCCCCC
DEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA