| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863593
Identifier: 33863593
GI number: 33863593
Start: 1410546
End: 1411256
Strand: Direct
Name: 33863593
Synonym: PMT1326
Alternate gene names: NA
Gene position: 1410546-1411256 (Clockwise)
Preceding gene: 33863592
Following gene: 33863595
Centisome position: 58.51
GC content: 48.52
Gene sequence:
>711_bases ATGCCGGAGCACCCTCAGGACTTCTTGAGTGACCAATCCCACTCAGAGCAACTCTCCACACCATTGATTCAAGTTGGCGC GTTGCTTAGAGAAGCCCGCGAAAAACGGGGGTTCTCAATAGCAGAAATTGCGGGAAGTCTTCGAATAGGCAAAGAGCAAC TAATAGCCCTGGAGAATGGAAACAAAGACCTACTACCTGAGCCGGTTTTTATTAGAGCCATGGTGCGCCGGGTCGCCGAG CGACTCAACCTGGATGCGACTGCCCTTGTGCAGCAAATTCAGGTCATCATTCCATCAAACTCCGAAGCCCTACGCCAATC AAAGAGCAAAGCGTCTCGTCCAAACCTAAAAGTGATACCTGCATTGGCCTTTTTGGGAGGGTTGATTGGATTGACTGCAG CAGGACTAGGCATCACCTATTACAGCAACCCCAACACCTTTACCCGCATCCAAACAAGCATCAACAACGCAATCATTTCA ATCAACGACACCGCCGAAGACATGATCTTTGGGTCTTCAACTCGTTCAAATGATGTAAAAGATGAGCCTAAGGACACCGA CCTAATCTCTCAGCCTGCAGATGCAGCACCTAGCCAAAATTTGCCATCAACATCTCCATCAGGGCTAAAAAAACCAAATA ATAATAATCAACCAGCTTCAACTGAACAGCCAAAAACGCAGCCAGGCAGCAACCCTAACCCCCAACAGTGA
Upstream 100 bases:
>100_bases AAACCAGGTGATCCCATATACATGGGGACAAATGATGCCTGACAAGCTCAGTGCTTCCAACTAAGGTCAAATGCATGCAG GTCAACACTCCTCTTCCTTA
Downstream 100 bases:
>100_bases GGCTGAGATTATTTTTGAAGGCGACCTTAGCGAGCCGTTCAGCTATCCACTAGAGCAAGGCCTAGAAATCTATGCAGGGC ATCCTGATCTGATTCATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE RLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIIS INDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ
Sequences:
>Translated_236_residues MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE RLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIIS INDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ >Mature_235_residues PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAER LNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISI NDTAEDMIFGSSTRSNDVKDEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25483; Mature: 25352
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIP CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH ALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISINDTAEDMIFGSSTRSNDVK HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEEECCCHHHHEECCCCCCCCCC DEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSNSEALRQSKSKASRPNLKVIP CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH ALAFLGGLIGLTAAGLGITYYSNPNTFTRIQTSINNAIISINDTAEDMIFGSSTRSNDVK HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEEECCCHHHHEECCCCCCCCCC DEPKDTDLISQPADAAPSQNLPSTSPSGLKKPNNNNQPASTEQPKTQPGSNPNPQQ CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA