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The map label for this gene is petA [H]

Identifier: 33863590

GI number: 33863590

Start: 1407682

End: 1408614

Strand: Direct

Name: petA [H]

Synonym: PMT1323

Alternate gene names: 33863590

Gene position: 1407682-1408614 (Clockwise)

Preceding gene: 33863589

Following gene: 33863591

Centisome position: 58.39

GC content: 48.12

Gene sequence:

>933_bases
ATGCGTCGCCTCATCCCCATCCTTCTCGGCTCACTGGTTCTTAGTTTGTCGATTCTTGTTGCTCCAGCTGCCAGCTGGGC
CTATCCCTTCTGGGCTCAACAGAACTACGACAACCCCCGAGAAGCTACTGGCAAGATCGTCTGTGCGAACTGTCATCTAG
CCCAAAAAACCACTCAGGCAGAAGTACCTCAATCAGTACTACCCGACAGCGTCTTCAAAGCAGTGGTAAAAATCCCCTAC
AAGAAAGACACAACAGAGATCAGCTCCGATGGCAGTGATGTGCCCCTCCAAGTGGGTGCCGTTGTCATGCTTCCTGATGG
ATTCAGGCTGGCCCCACAGGATCGCTGGAGCGAAGAGATAAAAGAAGAAACCAAAGGAGTCTTCTTCACTCAATACAGCG
AAGAAAAGGAGAACATCCTTCTTGTTGGCCCGCTTCCTGGTGACAACAACAAAGAAATTGTTTTCCCAATACTTTCACCT
GATCCTGCGACTGACAGCAGTATTCAATTCGGAAAATATTCCATCCACGTTGGAGGCAACCGTGGACGAGGCCAAATATT
GCCTACTGGTGAAAAAACCAATAACAACGCGTTCACAGCAACTGAAGCTGGCACAATTACATCTATTAAGTCTGGTAAAA
ATGGGGAAAGCGACATCAAGCTCAAAACTGACAGCGGAAAAGTTATCAGTGAAACCATTCCAGCTGGTCCAAGCCTGTTG
GTAAAAGTAGATGACAAAGTAGAGGCTGGCGCCCCCTTAACTAGCGACCCCAATAGTGGTGGCTTCGGACAACTCGATAC
CGAGGTTGTGCTCCAGAATCCAGTTCGAATCTATGGACTCTTGGCATTCTTTGTAGCAGTTTCTCTCGCTCAGATCTTAC
TTGTATTGAAGAAGAAGCAAGTCGAAAAAGTTCAGGCAGCTGAGGGGATCTGA

Upstream 100 bases:

>100_bases
GGACCGAGACAGACTTCCGCACGGGCGAGAAGCCCTGGTGGACCTGAATCTGACAACCAAACGCACCATCGTCGTTCCAG
CTCTCCTATCCCCTCGCATC

Downstream 100 bases:

>100_bases
TCCCCATTCATCTCAACTCAATGGACGCATTCATCGCGACCTTTACCTCTCCAGGGCCCGAGCTCTTTCAGCTCGGGCCC
TTTGCCTTGCGATGGTATGG

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPY
KKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSP
DPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLL
VKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQVEKVQAAEGI

Sequences:

>Translated_310_residues
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPY
KKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSP
DPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLL
VKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQVEKVQAAEGI
>Mature_310_residues
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPY
KKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSP
DPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLL
VKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQVEKVQAAEGI

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002325
- InterPro:   IPR011054 [H]

Pfam domain/function: PF01333 Apocytochr_F_C [H]

EC number: NA

Molecular weight: Translated: 33330; Mature: 33330

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS51010 CYTF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCHHHHCCHH
EVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEI
HCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECEEEECCCCCEECCCHHHHHHH
KEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGN
HHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEECEEEEEECCC
RGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLL
CCCCCEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCCCCEEEHHCCCCCEEE
VKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKVQAAEGI
HHHHHHHCCC
>Mature Secondary Structure
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCHHHHCCHH
EVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEI
HCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECEEEECCCCCEECCCHHHHHHH
KEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGN
HHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEECEEEEEECCC
RGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLL
CCCCCEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCCCCEEEHHCCCCCEEE
VKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKVQAAEGI
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA