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The map label for this gene is ydjH [C]

Identifier: 33863530

GI number: 33863530

Start: 1352000

End: 1353019

Strand: Direct

Name: ydjH [C]

Synonym: PMT1262

Alternate gene names: 33863530

Gene position: 1352000-1353019 (Clockwise)

Preceding gene: 33863529

Following gene: 33863533

Centisome position: 56.08

GC content: 54.8

Gene sequence:

>1020_bases
ATGCATCCCTCCATGGTTATCCCCAGGTTCAGTGATCGTCCTCTCGATGTGGTTGGAATAGGCAATGCCATCGTGGACGT
GCTGGTGCAGGCGGACGATGCCTTCCTTGATGCGCACAGTCTGAGTAAAGGCAATATGGCCTTGGTGGATGAAGCCCAAG
CAGAAGCGCTTTACTCCATCAGTGGACCAGGTCTAGAGACTTCAGGTGGATCCGCCGCCAACACCCTGGTAGGTCTGGCG
CAACTCGGCGGGAAGGCAGGCTTCATCGGTCGTGTCAAAAATGATCAACTAGGCAGCATTTTTAGCCACGACATCCGTTC
AGTAGGCGCTCGATTCGAGACTCCACCAGCAAGTGATGGTCCTTCTACGGCTCGCTGTCTGATCCTGGTCACCCCTGATG
CGCAACGCACCATGTGTACCTATCTAGGAGCTTCGGTACAGCTGGACCCTGAAGATTTAGACCTGTCAATGGTTCGCCAA
GCCAAGGTGCTCTACCTCGAGGGGTATCTATGGGACAGTCCGGCAGCCAAAAAAGCCTTCATCGCTGCCGCACAAGTCTG
TCGTGATTCAGGAGGCCAAGTAGCCCTATCTCTTTCCGATGGCTTCTGCGTTGATCGGCATCGCGACAGCTTCCTCGAGC
TGGTTGATAGCCACGTGGATCTGCTGTTTGCTAACGACAGCGAAATCACCTCTCTTTACAAGAGTGTCAGCTTCGAGGCT
GCATTGGAAGAAGTGAAAGGCCGCTGCAAGGTGGCAGCCCTCACCCGCAGCGAGCACGGATCTGTCGTGCTCGCTGGTGA
TCAACGCTGGGATATTCCTGCCTACAAACTTGGCAACGTGGTTGACACCACAGGTGCAGGTGATCTCTACGCCGGTGGCT
TCCTACACGGTTACACCCAGGGAACCACTTTGGAAACCTGTGGACAAATTGGATCCATCTGCGCCGGCCAGGTGATCACT
CAACTCGGTCCTCGCTCACAGGTGTCGCTTCCGGAATTAGTAGCGAAGCATCTGAATTAA

Upstream 100 bases:

>100_bases
GTAGAAGATCCGATCCACGGTCCCAAACGGGCTCTCCTAAGCGCCTAAGCACTTTCTCAAAACAAATGGTGGACGGGGAT
CGATACTTCTGAGGTTTCCC

Downstream 100 bases:

>100_bases
TTGAAGGGCGGTTTCACCCTTCAACAGGTTCCACAGCTGCTGCTACCCAAACAGCGTAAGGATCACTCGCAGTGGCTGAC
CAGTAAATCCACTCTGGGGT

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MHPSMVIPRFSDRPLDVVGIGNAIVDVLVQADDAFLDAHSLSKGNMALVDEAQAEALYSISGPGLETSGGSAANTLVGLA
QLGGKAGFIGRVKNDQLGSIFSHDIRSVGARFETPPASDGPSTARCLILVTPDAQRTMCTYLGASVQLDPEDLDLSMVRQ
AKVLYLEGYLWDSPAAKKAFIAAAQVCRDSGGQVALSLSDGFCVDRHRDSFLELVDSHVDLLFANDSEITSLYKSVSFEA
ALEEVKGRCKVAALTRSEHGSVVLAGDQRWDIPAYKLGNVVDTTGAGDLYAGGFLHGYTQGTTLETCGQIGSICAGQVIT
QLGPRSQVSLPELVAKHLN

Sequences:

>Translated_339_residues
MHPSMVIPRFSDRPLDVVGIGNAIVDVLVQADDAFLDAHSLSKGNMALVDEAQAEALYSISGPGLETSGGSAANTLVGLA
QLGGKAGFIGRVKNDQLGSIFSHDIRSVGARFETPPASDGPSTARCLILVTPDAQRTMCTYLGASVQLDPEDLDLSMVRQ
AKVLYLEGYLWDSPAAKKAFIAAAQVCRDSGGQVALSLSDGFCVDRHRDSFLELVDSHVDLLFANDSEITSLYKSVSFEA
ALEEVKGRCKVAALTRSEHGSVVLAGDQRWDIPAYKLGNVVDTTGAGDLYAGGFLHGYTQGTTLETCGQIGSICAGQVIT
QLGPRSQVSLPELVAKHLN
>Mature_339_residues
MHPSMVIPRFSDRPLDVVGIGNAIVDVLVQADDAFLDAHSLSKGNMALVDEAQAEALYSISGPGLETSGGSAANTLVGLA
QLGGKAGFIGRVKNDQLGSIFSHDIRSVGARFETPPASDGPSTARCLILVTPDAQRTMCTYLGASVQLDPEDLDLSMVRQ
AKVLYLEGYLWDSPAAKKAFIAAAQVCRDSGGQVALSLSDGFCVDRHRDSFLELVDSHVDLLFANDSEITSLYKSVSFEA
ALEEVKGRCKVAALTRSEHGSVVLAGDQRWDIPAYKLGNVVDTTGAGDLYAGGFLHGYTQGTTLETCGQIGSICAGQVIT
QLGPRSQVSLPELVAKHLN

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484975, Length=341, Percent_Identity=22.2873900293255, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI32484973, Length=341, Percent_Identity=22.2873900293255, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87081971, Length=344, Percent_Identity=25.2906976744186, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786684, Length=227, Percent_Identity=25.5506607929515, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17541820, Length=343, Percent_Identity=23.9067055393586, Blast_Score=94, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6322565, Length=331, Percent_Identity=26.8882175226586, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21355521, Length=342, Percent_Identity=28.3625730994152, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21356339, Length=332, Percent_Identity=24.6987951807229, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24663633, Length=332, Percent_Identity=24.6987951807229, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571668, Length=335, Percent_Identity=22.9850746268657, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 35814; Mature: 35814

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPSMVIPRFSDRPLDVVGIGNAIVDVLVQADDAFLDAHSLSKGNMALVDEAQAEALYSI
CCCCEECCCCCCCCEEEEECCHHHHHHHHHCCCCEEEHHCCCCCCEEEEECHHHHEEEEE
SGPGLETSGGSAANTLVGLAQLGGKAGFIGRVKNDQLGSIFSHDIRSVGARFETPPASDG
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PSTARCLILVTPDAQRTMCTYLGASVQLDPEDLDLSMVRQAKVLYLEGYLWDSPAAKKAF
CCCEEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHCEEEEEEEEEEECCCCHHHHH
IAAAQVCRDSGGQVALSLSDGFCVDRHRDSFLELVDSHVDLLFANDSEITSLYKSVSFEA
HHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
ALEEVKGRCKVAALTRSEHGSVVLAGDQRWDIPAYKLGNVVDTTGAGDLYAGGFLHGYTQ
HHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCEEECCCC
GTTLETCGQIGSICAGQVITQLGPRSQVSLPELVAKHLN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MHPSMVIPRFSDRPLDVVGIGNAIVDVLVQADDAFLDAHSLSKGNMALVDEAQAEALYSI
CCCCEECCCCCCCCEEEEECCHHHHHHHHHCCCCEEEHHCCCCCCEEEEECHHHHEEEEE
SGPGLETSGGSAANTLVGLAQLGGKAGFIGRVKNDQLGSIFSHDIRSVGARFETPPASDG
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PSTARCLILVTPDAQRTMCTYLGASVQLDPEDLDLSMVRQAKVLYLEGYLWDSPAAKKAF
CCCEEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHCEEEEEEEEEEECCCCHHHHH
IAAAQVCRDSGGQVALSLSDGFCVDRHRDSFLELVDSHVDLLFANDSEITSLYKSVSFEA
HHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
ALEEVKGRCKVAALTRSEHGSVVLAGDQRWDIPAYKLGNVVDTTGAGDLYAGGFLHGYTQ
HHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCEEECCCC
GTTLETCGQIGSICAGQVITQLGPRSQVSLPELVAKHLN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]