| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is gloB [H]
Identifier: 33863464
GI number: 33863464
Start: 1284495
End: 1285277
Strand: Direct
Name: gloB [H]
Synonym: PMT1194
Alternate gene names: 33863464
Gene position: 1284495-1285277 (Clockwise)
Preceding gene: 33863460
Following gene: 33863465
Centisome position: 53.28
GC content: 52.62
Gene sequence:
>783_bases ATGGAGGCAACCTCAACAGCTGCGACTAGCGATAAACAACGTTCATCGATCCATGCCCTTCCTGTTCTTCAGGACAACAT CATCTGGATCTGGATTAAAGGCAACCAGGCTGTCGTTGTGGATCCAGCAATCGCAGAACCAGTCAAGACATGGCTGCGAA CTCGAAAGCTCTCACTCGCAGCAGTACTTCAAACCCATCACCATGCTGATCACATTGGTGGCACCCTTGAGCTGCTTAGG GACTGGCCTAACGCAGCCGTGGTAGCAGCCGCTGAAGACCGTGATCGCATTCCCTTCCAGACGATCTCCGTTCGTGATAG AGACAAGGTTTCTCTTCTCAACAGCAGTGTTGAAGTGCTCGCTGTTGCGGGTCATACCAGAGCACACATTGCTTATTACC TGCCCACAAACAAGGAAGATCTTGAAGATCCAGCAGTGTTCTGTGGTGACACCCTTTTTGGAGCTGGATGTGGCCGACTG TTTGAAGGAACTGCCGAAGACATGTTCAAGGCTCTTCAACGTCTCAGTTGCCTGCCAGCGAAGACCCGTGTGTATTGCGC TCACGAATACACCGAAGCAAATCTGCGCTGGGCCTCCGCCCTGCATCCAGAAGATGTTGCTATCAGCGAACGACTGGCAG ACGTTTCAAGTCGCCGCCAGAGGGGTGCCCTGAGCCTGCCTAGCAGCATTTCAGAAGAACAACGTACCAACCTCTTCGTG CGTGCTCAGAGCAGCAAAGAGCTAGCAGAACTTCGCCACCACAAGGATCAATGGCGAAACTAA
Upstream 100 bases:
>100_bases AACCCAGCAGATTGAAAACGAGCAACCGAATCATTCAGCAAAGCTCCTTTTGCAAGCGCGACAGTGATCATGGAGCGATG CGTCGACCTGGACTTTAACG
Downstream 100 bases:
>100_bases GCACAAATATCTGACTCAGCAACAAGGCAGTCCTGTTGCAATGGAACAGGACCAACAGCTAGTGAGATTGCAATCCATTG AGATCAAGGCCGCTGGAACA
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGNQAVVVDPAIAEPVKTWLRTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVLAVAGHTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLSCLPAKTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFV RAQSSKELAELRHHKDQWRN
Sequences:
>Translated_260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGNQAVVVDPAIAEPVKTWLRTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVLAVAGHTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLSCLPAKTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFV RAQSSKELAELRHHKDQWRN >Mature_260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGNQAVVVDPAIAEPVKTWLRTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVLAVAGHTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLSCLPAKTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFV RAQSSKELAELRHHKDQWRN
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=266, Percent_Identity=36.0902255639098, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI94538320, Length=230, Percent_Identity=38.2608695652174, Blast_Score=150, Evalue=8e-37, Organism=Homo sapiens, GI14150041, Length=228, Percent_Identity=35.5263157894737, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI116642887, Length=225, Percent_Identity=35.1111111111111, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI21703352, Length=225, Percent_Identity=35.1111111111111, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI46361987, Length=205, Percent_Identity=36.0975609756098, Blast_Score=119, Evalue=3e-27, Organism=Escherichia coli, GI1786406, Length=229, Percent_Identity=36.6812227074236, Blast_Score=160, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17536925, Length=229, Percent_Identity=35.3711790393013, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=231, Percent_Identity=32.9004329004329, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=186, Percent_Identity=31.7204301075269, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI24667711, Length=232, Percent_Identity=38.7931034482759, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI21356335, Length=232, Percent_Identity=38.7931034482759, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24667703, Length=259, Percent_Identity=36.2934362934363, Blast_Score=160, Evalue=5e-40, Organism=Drosophila melanogaster, GI221330176, Length=166, Percent_Identity=28.9156626506024, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28990; Mature: 28990
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGNQAVVVDPAIAEPVKTWLRTRKLSLA CCCCCCCCCCCHHHCCEEECEEEECCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHH AVLQTHHHADHIGGTLELLRDWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVL HHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHCCCEEEE AVAGHTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRLFEGTAEDMFKALQRLSCLPA EEECCCEEEEEEEECCCCCCCCCCHHHHCCCHHHCCCHHHHCCCHHHHHHHHHHHHCCCC KTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFV CCEEEEEECCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEE RAQSSKELAELRHHKDQWRN EECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGNQAVVVDPAIAEPVKTWLRTRKLSLA CCCCCCCCCCCHHHCCEEECEEEECCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHH AVLQTHHHADHIGGTLELLRDWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVL HHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHCCCEEEE AVAGHTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRLFEGTAEDMFKALQRLSCLPA EEECCCEEEEEEEECCCCCCCCCCHHHHCCCHHHCCCHHHHCCCHHHHHHHHHHHHCCCC KTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFV CCEEEEEECCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEE RAQSSKELAELRHHKDQWRN EECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA