| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863459
Identifier: 33863459
GI number: 33863459
Start: 1279923
End: 1280585
Strand: Direct
Name: 33863459
Synonym: PMT1189
Alternate gene names: NA
Gene position: 1279923-1280585 (Clockwise)
Preceding gene: 33863458
Following gene: 33863460
Centisome position: 53.09
GC content: 54.9
Gene sequence:
>663_bases ATGGCAAAACCTGCACTGGTGGTGATGGCCCGCTGGCCGGCAGCAGGCAGATGCAAACGAAGACTGGCCGACACTCTTGG AATAGTGCGTGCAGCATCAATCCAGGCCAGGCTTACCAAACACACTCTGCGCGTGGCCAATCATCTGGCCAATAGAGGCC TGGTCGAGCTGCAATTCGCGATCACTGGCCTCGCTCCCAAGGCAGCCAAGCGCTGGGCACACGATCAAGGTGTGAGCACA GTGGAGCTTCAAGGCAAGGGAAGCCTGGGTGAACGGATGCGTCGACAGGTTTTGCGAGTGCAGCAACGACACCATCCACA AATCACAATGGGCCGCACCACATTGCTGATCGGCACAGACCTGCCAAATCTCTGTGATCGTGATCTGCTTCAGGCCCTAG AAGCTTTGCAAGAGCATGAGTTCGTACTTGGACCCGCTACTGATGGGGGCTATTGGTTACTTGGACTCTCAGGGCGCTTG GTAAAGCCCGTGACACGCTGGCCCTTCTGCGGCATTCCTTGGGGTAGCAATCAAGTGAAGCAAGTCACACTGCAGAAAGC AGCGGATGCAGGAGTAAGGCCTTGCTTACTTGGTCAACAAAACGATCTCGATTGCCTTGAAGATCTTTCACCATGGCAAG CATGCGAGGAAAGATTGATATGA
Upstream 100 bases:
>100_bases GGAGGTTGGCAAGCCCATGCCGCTCACCCTTGAACGAAACAACAAGACGATCGAATTAATCGTCAAACCAGCAGAGCTAC CCCGGCAGGGGTGAATTGAA
Downstream 100 bases:
>100_bases CAAGGATTTGAACCAGGAAACAACTCGTTTAAGGCAAGAAAAACGGGTCGAGAAAGAACAAGATGACCTCTTTCAAAAAG GAAGCAATGCCGCTCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAKPALVVMARWPAAGRCKRRLADTLGIVRAASIQARLTKHTLRVANHLANRGLVELQFAITGLAPKAAKRWAHDQGVST VELQGKGSLGERMRRQVLRVQQRHHPQITMGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRL VKPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSPWQACEERLI
Sequences:
>Translated_220_residues MAKPALVVMARWPAAGRCKRRLADTLGIVRAASIQARLTKHTLRVANHLANRGLVELQFAITGLAPKAAKRWAHDQGVST VELQGKGSLGERMRRQVLRVQQRHHPQITMGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRL VKPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSPWQACEERLI >Mature_219_residues AKPALVVMARWPAAGRCKRRLADTLGIVRAASIQARLTKHTLRVANHLANRGLVELQFAITGLAPKAAKRWAHDQGVSTV ELQGKGSLGERMRRQVLRVQQRHHPQITMGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLV KPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSPWQACEERLI
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24341; Mature: 24209
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPALVVMARWPAAGRCKRRLADTLGIVRAASIQARLTKHTLRVANHLANRGLVELQFA CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ITGLAPKAAKRWAHDQGVSTVELQGKGSLGERMRRQVLRVQQRHHPQITMGRTTLLIGTD HHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCEEEEEECC LPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLVKPVTRWPFCGIPWGSNQVK CCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEECHHHHCCCCCCCCCCCHHH QVTLQKAADAGVRPCLLGQQNDLDCLEDLSPWQACEERLI HHHHHHHHCCCCCCEECCCCCCHHHHHCCCHHHHHHHCCC >Mature Secondary Structure AKPALVVMARWPAAGRCKRRLADTLGIVRAASIQARLTKHTLRVANHLANRGLVELQFA CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ITGLAPKAAKRWAHDQGVSTVELQGKGSLGERMRRQVLRVQQRHHPQITMGRTTLLIGTD HHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCEEEEEECC LPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLVKPVTRWPFCGIPWGSNQVK CCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEECHHHHCCCCCCCCCCCHHH QVTLQKAADAGVRPCLLGQQNDLDCLEDLSPWQACEERLI HHHHHHHHCCCCCCEECCCCCCHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA