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The map label for this gene is 33863438

Identifier: 33863438

GI number: 33863438

Start: 1260075

End: 1261391

Strand: Direct

Name: 33863438

Synonym: PMT1168

Alternate gene names: NA

Gene position: 1260075-1261391 (Clockwise)

Preceding gene: 33863437

Following gene: 33863440

Centisome position: 52.27

GC content: 56.64

Gene sequence:

>1317_bases
GTGCTTGTGCATGCGGGCCCAGGTGCAGGCAAAACCCTCGGCGCCCTCCTCAGCTTCGAGGCCATGCAGCGAGGGGGTGG
CTTAACGCGATTCATAGTTTTTTGCCACCGCAACTCGATCCTGAATCAATGGCACCAAGCATCTAAACAACTAGGCCTCA
ACTTGCAGGACTGGGAAGCCTTCCCAGAACAACCCGAGATCCTCAAACAAGCAGACGGCTGGGCCGTGACCTATCAAGGT
GCCGGTCTTCAGTTAGAGACCCTGATAGCAGAACTAAAAGACTGGGCCGGTGACGGCTTACTCGCTATTGCCGATGAAGC
CCACCACCTCGGGATGAATCCAGATGAACCTCAGGGCCCAGCCTGGGGACGCACCTTTCTTGCTCTCACTGGCAGCAGCA
AAATACGGCTTGGTCTGACTGGCACGCCCTTCCGCGCCGACAATCTGGCCTTCTGTGCAGCCCGAAGAGTGCGCGTAGAA
GCCGAGGGGGCTCTGGTGGAGCAGATCAGCCCAGATCTCTGCGTGGAACCCAGTGAGCTGATTCATGCTGGAGATGTGCG
CCCCCTCGAATTCCGCTTCCAGGATGGCTGGGTGGAACACAGCCGTCCTGGACAGCCCGATCGAGATGTCTCACCCCTCT
CTGCTGAAGTGCGTGAAAGCTGGCGAGCACGCAATCTACGTAGGGCTATTCGGATCTCAGACTCAAGCAGTATTGCCTTG
CAACTGTTACTACGTGCACGACGTCAACTTAAGAAGGTACGTCGCCACCATCACGATGCAGCAGGCCTTGTGATCGCTAG
AGATATCGAACACGCTGGTGGCATCGCCCAGCTCCTGCAAGAGGAAGGCGATCGTGTCGAGCTGGTGCACTCCCAAGACC
GTGATGCCAGTGCTCGCCTGGCAGCCTTCCAAACAAGCAAAGCCGACTGGTTAGTCAGCATCGACATGTGTGCAGAGGGA
TTCGATGCCCCAAGACTTCGCGTGGTTGCTTATCTCACAACGGTGGCAACGCGCAGCAGATTCATACAGGGAATCACTCG
CGCGGTAAGGATCTCCACAGCAAGAGCATCGTTAGAGCCGGTACCTCGTCACCCTTCCTATGTCTTTGCACCTGCAGATC
CCTTACTGATGGGCCATGCCCGAAGCTGGTCGAAGACAGAGCCATATCTCATCAGAGACAGTGAAGCGAAAGCAGAGGAA
AACACAACGATGGGTCACTGGCGAGGCCCAAGCCTGCCACTCGAAGCAGTCAACGATGGAGCAGGTGCTGTCATCCGACT
ACGCACACCAAATCTGCCCAGTTTTTTGCAGCGTTGA

Upstream 100 bases:

>100_bases
AGAGTCCTGCCAGCCCAAAATCCGACCCCGGATTTGGCAGCAACAGCTGATTCAGCTGCTTCGTCGCAGACTGTCTCCAC
AGGCAATCCAAGGGCGAGAT

Downstream 100 bases:

>100_bases
CGACAACTTTTACAAAAGAAAAATGCGACGTTCTATAAAATCAAACCAAATACAGACCACTTACATGCAATTCTCTGGCC
AATGGGGACCAATCATGAAC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLVHAGPGAGKTLGALLSFEAMQRGGGLTRFIVFCHRNSILNQWHQASKQLGLNLQDWEAFPEQPEILKQADGWAVTYQG
AGLQLETLIAELKDWAGDGLLAIADEAHHLGMNPDEPQGPAWGRTFLALTGSSKIRLGLTGTPFRADNLAFCAARRVRVE
AEGALVEQISPDLCVEPSELIHAGDVRPLEFRFQDGWVEHSRPGQPDRDVSPLSAEVRESWRARNLRRAIRISDSSSIAL
QLLLRARRQLKKVRRHHHDAAGLVIARDIEHAGGIAQLLQEEGDRVELVHSQDRDASARLAAFQTSKADWLVSIDMCAEG
FDAPRLRVVAYLTTVATRSRFIQGITRAVRISTARASLEPVPRHPSYVFAPADPLLMGHARSWSKTEPYLIRDSEAKAEE
NTTMGHWRGPSLPLEAVNDGAGAVIRLRTPNLPSFLQR

Sequences:

>Translated_438_residues
MLVHAGPGAGKTLGALLSFEAMQRGGGLTRFIVFCHRNSILNQWHQASKQLGLNLQDWEAFPEQPEILKQADGWAVTYQG
AGLQLETLIAELKDWAGDGLLAIADEAHHLGMNPDEPQGPAWGRTFLALTGSSKIRLGLTGTPFRADNLAFCAARRVRVE
AEGALVEQISPDLCVEPSELIHAGDVRPLEFRFQDGWVEHSRPGQPDRDVSPLSAEVRESWRARNLRRAIRISDSSSIAL
QLLLRARRQLKKVRRHHHDAAGLVIARDIEHAGGIAQLLQEEGDRVELVHSQDRDASARLAAFQTSKADWLVSIDMCAEG
FDAPRLRVVAYLTTVATRSRFIQGITRAVRISTARASLEPVPRHPSYVFAPADPLLMGHARSWSKTEPYLIRDSEAKAEE
NTTMGHWRGPSLPLEAVNDGAGAVIRLRTPNLPSFLQR
>Mature_438_residues
MLVHAGPGAGKTLGALLSFEAMQRGGGLTRFIVFCHRNSILNQWHQASKQLGLNLQDWEAFPEQPEILKQADGWAVTYQG
AGLQLETLIAELKDWAGDGLLAIADEAHHLGMNPDEPQGPAWGRTFLALTGSSKIRLGLTGTPFRADNLAFCAARRVRVE
AEGALVEQISPDLCVEPSELIHAGDVRPLEFRFQDGWVEHSRPGQPDRDVSPLSAEVRESWRARNLRRAIRISDSSSIAL
QLLLRARRQLKKVRRHHHDAAGLVIARDIEHAGGIAQLLQEEGDRVELVHSQDRDASARLAAFQTSKADWLVSIDMCAEG
FDAPRLRVVAYLTTVATRSRFIQGITRAVRISTARASLEPVPRHPSYVFAPADPLLMGHARSWSKTEPYLIRDSEAKAEE
NTTMGHWRGPSLPLEAVNDGAGAVIRLRTPNLPSFLQR

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 48384; Mature: 48384

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHAGPGAGKTLGALLSFEAMQRGGGLTRFIVFCHRNSILNQWHQASKQLGLNLQDWEA
CEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHC
FPEQPEILKQADGWAVTYQGAGLQLETLIAELKDWAGDGLLAIADEAHHLGMNPDEPQGP
CCCCHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCC
AWGRTFLALTGSSKIRLGLTGTPFRADNLAFCAARRVRVEAEGALVEQISPDLCVEPSEL
CCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHEEEECCCCHHHHCCCCCCCCHHHH
IHAGDVRPLEFRFQDGWVEHSRPGQPDRDVSPLSAEVRESWRARNLRRAIRISDSSSIAL
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHH
QLLLRARRQLKKVRRHHHDAAGLVIARDIEHAGGIAQLLQEEGDRVELVHSQDRDASARL
HHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCHHHHHHHCCCCEEEEEECCCCCCHHHE
AAFQTSKADWLVSIDMCAEGFDAPRLRVVAYLTTVATRSRFIQGITRAVRISTARASLEP
EEEECCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPRHPSYVFAPADPLLMGHARSWSKTEPYLIRDSEAKAEENTTMGHWRGPSLPLEAVNDG
CCCCCCEEECCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCC
AGAVIRLRTPNLPSFLQR
CCEEEEEECCCCHHHHCC
>Mature Secondary Structure
MLVHAGPGAGKTLGALLSFEAMQRGGGLTRFIVFCHRNSILNQWHQASKQLGLNLQDWEA
CEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHC
FPEQPEILKQADGWAVTYQGAGLQLETLIAELKDWAGDGLLAIADEAHHLGMNPDEPQGP
CCCCHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCC
AWGRTFLALTGSSKIRLGLTGTPFRADNLAFCAARRVRVEAEGALVEQISPDLCVEPSEL
CCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHEEEECCCCHHHHCCCCCCCCHHHH
IHAGDVRPLEFRFQDGWVEHSRPGQPDRDVSPLSAEVRESWRARNLRRAIRISDSSSIAL
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHH
QLLLRARRQLKKVRRHHHDAAGLVIARDIEHAGGIAQLLQEEGDRVELVHSQDRDASARL
HHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCHHHHHHHCCCCEEEEEECCCCCCHHHE
AAFQTSKADWLVSIDMCAEGFDAPRLRVVAYLTTVATRSRFIQGITRAVRISTARASLEP
EEEECCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPRHPSYVFAPADPLLMGHARSWSKTEPYLIRDSEAKAEENTTMGHWRGPSLPLEAVNDG
CCCCCCEEECCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCC
AGAVIRLRTPNLPSFLQR
CCEEEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]