| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863410
Identifier: 33863410
GI number: 33863410
Start: 1229715
End: 1229972
Strand: Direct
Name: 33863410
Synonym: PMT1139
Alternate gene names: NA
Gene position: 1229715-1229972 (Clockwise)
Preceding gene: 33863409
Following gene: 33863411
Centisome position: 51.01
GC content: 44.57
Gene sequence:
>258_bases ATGACAGCACCAGCACTTTATTCGTACGCAAAAGTTCAGTCCATAGAGATAGATGGCAAAGAAGACGTGATCACCCTTAG ACCAGTGTTTAAATCTAACTCGTTCAATTCATTGGACGAGGGTGATCATTATGCATTCCAGACAACTATCGGCGACAAAA CCTTCACCTTTGAGACTGTTGTCAATAATCAAGGGCCAAGCACAACCCTGGGACTAGAGAATGATGACGCCGCTGCAATC GTTGAGATGCTCGACTAA
Upstream 100 bases:
>100_bases AGCCGTGCCACTAAAAAGAGACAAGCTTTATATTTAACACTTCCTTAACTCTTAGTCATCATTGAATTAGCCTGCTTTAA GGCTTAAATGATCGAGCACA
Downstream 100 bases:
>100_bases AATGAAGACAATAAGATTAGCGATTAGGAATTCGAGAAAGGCATGGAGAATGCCGTGGTGTCATATGAGGAAGATATCAG GCTTCATGGAAATCATTCCT
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAI VEMLD
Sequences:
>Translated_85_residues MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAI VEMLD >Mature_84_residues TAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAIV EMLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9308; Mature: 9177
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETV CCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEE VNNQGPSTTLGLENDDAAAIVEMLD ECCCCCCEEECCCCCCHHHHEEECC >Mature Secondary Structure TAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETV CCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEE VNNQGPSTTLGLENDDAAAIVEMLD ECCCCCCEEECCCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA