Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863410

Identifier: 33863410

GI number: 33863410

Start: 1229715

End: 1229972

Strand: Direct

Name: 33863410

Synonym: PMT1139

Alternate gene names: NA

Gene position: 1229715-1229972 (Clockwise)

Preceding gene: 33863409

Following gene: 33863411

Centisome position: 51.01

GC content: 44.57

Gene sequence:

>258_bases
ATGACAGCACCAGCACTTTATTCGTACGCAAAAGTTCAGTCCATAGAGATAGATGGCAAAGAAGACGTGATCACCCTTAG
ACCAGTGTTTAAATCTAACTCGTTCAATTCATTGGACGAGGGTGATCATTATGCATTCCAGACAACTATCGGCGACAAAA
CCTTCACCTTTGAGACTGTTGTCAATAATCAAGGGCCAAGCACAACCCTGGGACTAGAGAATGATGACGCCGCTGCAATC
GTTGAGATGCTCGACTAA

Upstream 100 bases:

>100_bases
AGCCGTGCCACTAAAAAGAGACAAGCTTTATATTTAACACTTCCTTAACTCTTAGTCATCATTGAATTAGCCTGCTTTAA
GGCTTAAATGATCGAGCACA

Downstream 100 bases:

>100_bases
AATGAAGACAATAAGATTAGCGATTAGGAATTCGAGAAAGGCATGGAGAATGCCGTGGTGTCATATGAGGAAGATATCAG
GCTTCATGGAAATCATTCCT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAI
VEMLD

Sequences:

>Translated_85_residues
MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAI
VEMLD
>Mature_84_residues
TAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETVVNNQGPSTTLGLENDDAAAIV
EMLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9308; Mature: 9177

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETV
CCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEE
VNNQGPSTTLGLENDDAAAIVEMLD
ECCCCCCEEECCCCCCHHHHEEECC
>Mature Secondary Structure 
TAPALYSYAKVQSIEIDGKEDVITLRPVFKSNSFNSLDEGDHYAFQTTIGDKTFTFETV
CCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEE
VNNQGPSTTLGLENDDAAAIVEMLD
ECCCCCCEEECCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA