| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863382
Identifier: 33863382
GI number: 33863382
Start: 1203073
End: 1205178
Strand: Direct
Name: 33863382
Synonym: PMT1111
Alternate gene names: NA
Gene position: 1203073-1205178 (Clockwise)
Preceding gene: 33863377
Following gene: 33863386
Centisome position: 49.9
GC content: 55.6
Gene sequence:
>2106_bases GTGCCAGCTTCTGTGGTCCGTCTTCCAACCTTAAACAGGCTCTGGCAGAGCTGGTTACGCAGCGAGTCGCCGCAGCGTCC GCTGCTCCGCTGGTCGATGCCCCACAAGGCTGCTCTACTGATGAGTTGCTTTGCTGTAGCAATTATCTCTAGCTGGCCCT GGTTGTTTCAACCGAATTTGAACCCAGGACTTCCAGCTCCATTTGAGGCGCGAGCTCCCAGGGATGCTCGCGTCGTTGAC AGTGAAGCTCAAGAGCAAAGGCGATCTCAGCTCGTACAGAGCACCTTTGTGCAAGTGATCGATCAACAAGAAACAACCCG ACTCAAAAAACGGCTAGAGCGCAATCTCGCTGAGCTGGAACGTGTTGCTCGCAACAGTGATGCAGGACGGATAGGGCCTG TCAATCTCAACGCCGAAGAACAAATCTGGCTCCAAGCGCGCTCCCAACAAGAACGAAAACGCTGGGATATGGCCATCCGC CGTGCCTCAGAACGCATGCTCAGTCAAGGACTGAACAATCTCGCCCTTGAGCAGCTACAAGAGGCGGCCGCAATTCAATT AGCCGACCTAGGGGAGCAGAACGGCCCTGCCAGAAGTCTTAGCAGCAAGCTGCTCGCCAGCACCTATCAAGGCAGTAGCA ATCTGCGCACAGATCCAGCCCTCAGCCAACGCCTCATTGAAGAGCTGATCACCAAACAAGACATTCCAATCATTGAAGTC CGCCGCGGCGATCTGATCACGAGCAAAGGAGAACCCATCAGCCCAAGGGCCTATGCCGTTTTAAATCACTTCGGTCTTGT CAGTCGAGGCCCAGAATGGGGTCCTTTGCTCAGCCGATTCAGTACAGCCCTTGCCGGCTGTGGCGTGATGCTGCTGATCA TGCGACGGGAACGTCCCTGCCTAGAAGCACGTCATGGGCTACTGGCAGTGGGATTGCTATTGGTCACTCAGGCCAGCAAA CTCTGGTTCGTTCCTACTGTGAGCCCCCTAGCAGTAATCGTTCCGCCGACACTCCTGCTCGCCCAAGGTCTTGGTACAAC CTGTGGCTTGGCTTGGATGGCGGTAGAGAGCCTGCTATGGCCTATGCCAGTCAACGGCCTTGGAGAAGGCCGAATGATCA TTGCCTGTGCAATCGCTGCAGTGGCAGCTATCTATAGCCGTCGTCTTCGGAGCAGAGCACAGCTGCTGCAAATGGCATTT TTGTTGCCCTTAGGAGCCCTACTGGCTGAGTGGCTGCTCCTTAGTGCCGGCGGCAGCGGGGCCTGGGGTCGATTTGCACC CAATGGCAACGAACTTCTCTCAGAAGCACTGCTAATGGGGATCTTGCTGATGCTAGCGATCCTACTGATCCCAATTTTGG AGACCTCTTTTGGCCTGCTCACCAGAGCCCGCTTGATGGAACTAGCCGATCAAGAGCGTCCCCTTCTGCGCCGCCTCTCC TCAGAAGCTCCAGGGACTTTCGAGCACACATTAATGATCTGCGGACTTGCAGAGGAAGGGGCCAGAGCAATCGGTGCCGA TGTCGACCTGATCCGAACCGGTGCCTTGTACCACGATGTTGGCAAGCTCCACGCTCCTCAGTGGTTTATCGAGAATCAGG TCGAAGGAGAAAAAAACCCTCACGATCAACTGAACAATCCCATCGCCAGCGCAGAGGTCCTTCAAGCCCATGTGGATGAG GGATTAAAACTTGCCCGTCGCTACCGCCTACCGCGCCGAGTAGCGGACTTCATCCCTGAGCATCAAGGCACCTTGAAGAT GGGGTATTTCCTTCATCGTGCAAGAGAACTGGACCCCTCCGTTCCCGAAAAGAACTTCCGCTACCGCGGACCGATACCTC GTTCCCGAGAGACCGGAATCTTAATGCTGGCCGACGGCTGTGAAGCATGCCTTCGATCCCTACCACCGAACACCTCTGAT AGCAAGGCACACTCCACTGTGAAGAGGATTATTGAGGAGCGGCAACGGGATGGTCAACTGAATAAAAGCAGCCTCAGCCG AGCCGAAGTAGAACTCGTTGTGCGAGCTTTCGTACGCGTCTGGCGACGCATGCGCCATCGCCGTATCCCTTACCCGATAC CTGCACAAAAGGCTTTCCCCGATTAA
Upstream 100 bases:
>100_bases CAATTCTGCGGCCAGTTGTTTGCCATCAAGCCTAAGGGCCATTCACCGATCCGATGCTTCCCCAAGCATGCACGCAGAAG AGAGCTAGCGTTTAGGACAA
Downstream 100 bases:
>100_bases AGGCACTGTTTAACTTGCTGGACATTCATCTATTTCAGCAACAACGAGGAAAGACCTATCTACATTTTTGAAGCTGTACT TTTCTCTTACTTAATTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MPASVVRLPTLNRLWQSWLRSESPQRPLLRWSMPHKAALLMSCFAVAIISSWPWLFQPNLNPGLPAPFEARAPRDARVVD SEAQEQRRSQLVQSTFVQVIDQQETTRLKKRLERNLAELERVARNSDAGRIGPVNLNAEEQIWLQARSQQERKRWDMAIR RASERMLSQGLNNLALEQLQEAAAIQLADLGEQNGPARSLSSKLLASTYQGSSNLRTDPALSQRLIEELITKQDIPIIEV RRGDLITSKGEPISPRAYAVLNHFGLVSRGPEWGPLLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLVTQASK LWFVPTVSPLAVIVPPTLLLAQGLGTTCGLAWMAVESLLWPMPVNGLGEGRMIIACAIAAVAAIYSRRLRSRAQLLQMAF LLPLGALLAEWLLLSAGGSGAWGRFAPNGNELLSEALLMGILLMLAILLIPILETSFGLLTRARLMELADQERPLLRRLS SEAPGTFEHTLMICGLAEEGARAIGADVDLIRTGALYHDVGKLHAPQWFIENQVEGEKNPHDQLNNPIASAEVLQAHVDE GLKLARRYRLPRRVADFIPEHQGTLKMGYFLHRARELDPSVPEKNFRYRGPIPRSRETGILMLADGCEACLRSLPPNTSD SKAHSTVKRIIEERQRDGQLNKSSLSRAEVELVVRAFVRVWRRMRHRRIPYPIPAQKAFPD
Sequences:
>Translated_701_residues MPASVVRLPTLNRLWQSWLRSESPQRPLLRWSMPHKAALLMSCFAVAIISSWPWLFQPNLNPGLPAPFEARAPRDARVVD SEAQEQRRSQLVQSTFVQVIDQQETTRLKKRLERNLAELERVARNSDAGRIGPVNLNAEEQIWLQARSQQERKRWDMAIR RASERMLSQGLNNLALEQLQEAAAIQLADLGEQNGPARSLSSKLLASTYQGSSNLRTDPALSQRLIEELITKQDIPIIEV RRGDLITSKGEPISPRAYAVLNHFGLVSRGPEWGPLLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLVTQASK LWFVPTVSPLAVIVPPTLLLAQGLGTTCGLAWMAVESLLWPMPVNGLGEGRMIIACAIAAVAAIYSRRLRSRAQLLQMAF LLPLGALLAEWLLLSAGGSGAWGRFAPNGNELLSEALLMGILLMLAILLIPILETSFGLLTRARLMELADQERPLLRRLS SEAPGTFEHTLMICGLAEEGARAIGADVDLIRTGALYHDVGKLHAPQWFIENQVEGEKNPHDQLNNPIASAEVLQAHVDE GLKLARRYRLPRRVADFIPEHQGTLKMGYFLHRARELDPSVPEKNFRYRGPIPRSRETGILMLADGCEACLRSLPPNTSD SKAHSTVKRIIEERQRDGQLNKSSLSRAEVELVVRAFVRVWRRMRHRRIPYPIPAQKAFPD >Mature_700_residues PASVVRLPTLNRLWQSWLRSESPQRPLLRWSMPHKAALLMSCFAVAIISSWPWLFQPNLNPGLPAPFEARAPRDARVVDS EAQEQRRSQLVQSTFVQVIDQQETTRLKKRLERNLAELERVARNSDAGRIGPVNLNAEEQIWLQARSQQERKRWDMAIRR ASERMLSQGLNNLALEQLQEAAAIQLADLGEQNGPARSLSSKLLASTYQGSSNLRTDPALSQRLIEELITKQDIPIIEVR RGDLITSKGEPISPRAYAVLNHFGLVSRGPEWGPLLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLVTQASKL WFVPTVSPLAVIVPPTLLLAQGLGTTCGLAWMAVESLLWPMPVNGLGEGRMIIACAIAAVAAIYSRRLRSRAQLLQMAFL LPLGALLAEWLLLSAGGSGAWGRFAPNGNELLSEALLMGILLMLAILLIPILETSFGLLTRARLMELADQERPLLRRLSS EAPGTFEHTLMICGLAEEGARAIGADVDLIRTGALYHDVGKLHAPQWFIENQVEGEKNPHDQLNNPIASAEVLQAHVDEG LKLARRYRLPRRVADFIPEHQGTLKMGYFLHRARELDPSVPEKNFRYRGPIPRSRETGILMLADGCEACLRSLPPNTSDS KAHSTVKRIIEERQRDGQLNKSSLSRAEVELVVRAFVRVWRRMRHRRIPYPIPAQKAFPD
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 78256; Mature: 78125
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASVVRLPTLNRLWQSWLRSESPQRPLLRWSMPHKAALLMSCFAVAIISSWPWLFQPNL CCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC NPGLPAPFEARAPRDARVVDSEAQEQRRSQLVQSTFVQVIDQQETTRLKKRLERNLAELE CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVARNSDAGRIGPVNLNAEEQIWLQARSQQERKRWDMAIRRASERMLSQGLNNLALEQLQ HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH EAAAIQLADLGEQNGPARSLSSKLLASTYQGSSNLRTDPALSQRLIEELITKQDIPIIEV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE RRGDLITSKGEPISPRAYAVLNHFGLVSRGPEWGPLLSRFSTALAGCGVMLLIMRRERPC CCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH LEARHGLLAVGLLLVTQASKLWFVPTVSPLAVIVPPTLLLAQGLGTTCGLAWMAVESLLW HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHC PMPVNGLGEGRMIIACAIAAVAAIYSRRLRSRAQLLQMAFLLPLGALLAEWLLLSAGGSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWGRFAPNGNELLSEALLMGILLMLAILLIPILETSFGLLTRARLMELADQERPLLRRLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC SEAPGTFEHTLMICGLAEEGARAIGADVDLIRTGALYHDVGKLHAPQWFIENQVEGEKNP CCCCCCHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC HDQLNNPIASAEVLQAHVDEGLKLARRYRLPRRVADFIPEHQGTLKMGYFLHRARELDPS HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC VPEKNFRYRGPIPRSRETGILMLADGCEACLRSLPPNTSDSKAHSTVKRIIEERQRDGQL CCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC NKSSLSRAEVELVVRAFVRVWRRMRHRRIPYPIPAQKAFPD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PASVVRLPTLNRLWQSWLRSESPQRPLLRWSMPHKAALLMSCFAVAIISSWPWLFQPNL CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC NPGLPAPFEARAPRDARVVDSEAQEQRRSQLVQSTFVQVIDQQETTRLKKRLERNLAELE CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVARNSDAGRIGPVNLNAEEQIWLQARSQQERKRWDMAIRRASERMLSQGLNNLALEQLQ HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH EAAAIQLADLGEQNGPARSLSSKLLASTYQGSSNLRTDPALSQRLIEELITKQDIPIIEV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE RRGDLITSKGEPISPRAYAVLNHFGLVSRGPEWGPLLSRFSTALAGCGVMLLIMRRERPC CCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH LEARHGLLAVGLLLVTQASKLWFVPTVSPLAVIVPPTLLLAQGLGTTCGLAWMAVESLLW HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHC PMPVNGLGEGRMIIACAIAAVAAIYSRRLRSRAQLLQMAFLLPLGALLAEWLLLSAGGSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWGRFAPNGNELLSEALLMGILLMLAILLIPILETSFGLLTRARLMELADQERPLLRRLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC SEAPGTFEHTLMICGLAEEGARAIGADVDLIRTGALYHDVGKLHAPQWFIENQVEGEKNP CCCCCCHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC HDQLNNPIASAEVLQAHVDEGLKLARRYRLPRRVADFIPEHQGTLKMGYFLHRARELDPS HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC VPEKNFRYRGPIPRSRETGILMLADGCEACLRSLPPNTSDSKAHSTVKRIIEERQRDGQL CCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC NKSSLSRAEVELVVRAFVRVWRRMRHRRIPYPIPAQKAFPD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]