| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863309
Identifier: 33863309
GI number: 33863309
Start: 1115793
End: 1116200
Strand: Direct
Name: 33863309
Synonym: PMT1038
Alternate gene names: NA
Gene position: 1115793-1116200 (Clockwise)
Preceding gene: 33863306
Following gene: 33863311
Centisome position: 46.28
GC content: 55.64
Gene sequence:
>408_bases ATGACGATGACCACAATCTCGTGTTGCTACAAGGGCAATCTGCGCTGTGAAGCCCTACATACCCCCTCTGGGGATCGTCT TAGCACCGATGCCCCTATCGATCACGAAGGCAAGGGCGAGGCCTTCTCACCTACAGACCTAGTCGCAACAGCTCTTGGCA CCTGCGTGCTCACCGTGATGGGCATCACCGCCCGTCGCAAGGGCTGGAGAATCGAGGGCGCAGCAGTTGACGTTGAGAAG ATCATGACCAGTGAAGGCCAGCGCAGTATCCAAGCCCTGAAACTTCGAATTAGCATGCCGCCTGAGCTGAGCGATGAGCA GGTCAAACTGCTTCAAAGGGTGGTTGATACCTGCCCAGTAAAACGTAACCTCGAAGAAGGGATCGCTATGGAGTTCAGCT GGAGCTGA
Upstream 100 bases:
>100_bases AAGAGTTTAATTAATCGTTGCAGGCTACTGGGGCCTTTGATTTTTTATTCGATGAGGTTCTCAAAGACATCCAATCGCAG AATAATCAGTTCAGAGCCGA
Downstream 100 bases:
>100_bases TTGACTTCCCTCGTACGGCAAGCCTGCCTAAAGCAGTTCTAAGCAGGGGTCCACTGATACGACTTCAGTTCACTCCCATA CCTATCTTCCGTGAAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Redox Protein; Stress-Induced Protein OsmC; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; OsmC-Like Protein; Osmc-Like Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTMTTISCCYKGNLRCEALHTPSGDRLSTDAPIDHEGKGEAFSPTDLVATALGTCVLTVMGITARRKGWRIEGAAVDVEK IMTSEGQRSIQALKLRISMPPELSDEQVKLLQRVVDTCPVKRNLEEGIAMEFSWS
Sequences:
>Translated_135_residues MTMTTISCCYKGNLRCEALHTPSGDRLSTDAPIDHEGKGEAFSPTDLVATALGTCVLTVMGITARRKGWRIEGAAVDVEK IMTSEGQRSIQALKLRISMPPELSDEQVKLLQRVVDTCPVKRNLEEGIAMEFSWS >Mature_134_residues TMTTISCCYKGNLRCEALHTPSGDRLSTDAPIDHEGKGEAFSPTDLVATALGTCVLTVMGITARRKGWRIEGAAVDVEKI MTSEGQRSIQALKLRISMPPELSDEQVKLLQRVVDTCPVKRNLEEGIAMEFSWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14798; Mature: 14667
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTTISCCYKGNLRCEALHTPSGDRLSTDAPIDHEGKGEAFSPTDLVATALGTCVLTVM CCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GITARRKGWRIEGAAVDVEKIMTSEGQRSIQALKLRISMPPELSDEQVKLLQRVVDTCPV HHHHCCCCCEECCCEEHHHHHHHCCCHHHEEHEEEEECCCCCCCHHHHHHHHHHHHHCCC KRNLEEGIAMEFSWS CCCCCCCEEEEEECC >Mature Secondary Structure TMTTISCCYKGNLRCEALHTPSGDRLSTDAPIDHEGKGEAFSPTDLVATALGTCVLTVM CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GITARRKGWRIEGAAVDVEKIMTSEGQRSIQALKLRISMPPELSDEQVKLLQRVVDTCPV HHHHCCCCCEECCCEEHHHHHHHCCCHHHEEHEEEEECCCCCCCHHHHHHHHHHHHHCCC KRNLEEGIAMEFSWS CCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA