Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863259

Identifier: 33863259

GI number: 33863259

Start: 1067146

End: 1067499

Strand: Direct

Name: 33863259

Synonym: PMT0988

Alternate gene names: NA

Gene position: 1067146-1067499 (Clockwise)

Preceding gene: 33863255

Following gene: 33863260

Centisome position: 44.26

GC content: 51.69

Gene sequence:

>354_bases
TTGATCAAAACTCAACCTGGTTGGAGAAATCTGACGATCAAAGGTTCACATAGAGCGACACCAGCCAGTAGCAGGGCGAT
TGCCAGAAAAAGAGCTTTGCCACTCATCTATTGCATTGGGGCGTGTCATCCCTTTCTAATTTCACCTGAGGTGCTGTGCA
GCATTGATCGATCGGTGCACTCATCAACACTGGGGTGGCGCAGCGATCCAAAACCCCTTGATGCCTTGTTTACATCGCTC
CATGAGCTCCATGGCGTCTTCGATGCAATCGTCAAGCCTCCTTGCCTTGAGCAGCAACAGAGGCTGATGAGGCCATCAAT
CAAGCGTGCTGCACGCCTCGAGGCTTCCTTCTAG

Upstream 100 bases:

>100_bases
CCAGCACAAATTCATAAACAGCGATCCCCACAAGGGATAGGACGATGGCCAGAACCACAACTTTGCCGTTCATCGATGCA
CCACTTGAAAGCATGAAGGA

Downstream 100 bases:

>100_bases
TGCAACTGATCAACGCCTCCTTTCAACTCGAAGTTCTCAACGCTCTTCTGATCAACATCGATCTACGGCCTGGCTGAAGA
GGCAACAACAGAGCCACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIKTQPGWRNLTIKGSHRATPASSRAIARKRALPLIYCIGACHPFLISPEVLCSIDRSVHSSTLGWRSDPKPLDALFTSL
HELHGVFDAIVKPPCLEQQQRLMRPSIKRAARLEASF

Sequences:

>Translated_117_residues
MIKTQPGWRNLTIKGSHRATPASSRAIARKRALPLIYCIGACHPFLISPEVLCSIDRSVHSSTLGWRSDPKPLDALFTSL
HELHGVFDAIVKPPCLEQQQRLMRPSIKRAARLEASF
>Mature_117_residues
MIKTQPGWRNLTIKGSHRATPASSRAIARKRALPLIYCIGACHPFLISPEVLCSIDRSVHSSTLGWRSDPKPLDALFTSL
HELHGVFDAIVKPPCLEQQQRLMRPSIKRAARLEASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13068; Mature: 13068

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTQPGWRNLTIKGSHRATPASSRAIARKRALPLIYCIGACHPFLISPEVLCSIDRSVH
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
SSTLGWRSDPKPLDALFTSLHELHGVFDAIVKPPCLEQQQRLMRPSIKRAARLEASF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKTQPGWRNLTIKGSHRATPASSRAIARKRALPLIYCIGACHPFLISPEVLCSIDRSVH
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
SSTLGWRSDPKPLDALFTSLHELHGVFDAIVKPPCLEQQQRLMRPSIKRAARLEASF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA