| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863247
Identifier: 33863247
GI number: 33863247
Start: 1053325
End: 1053654
Strand: Direct
Name: 33863247
Synonym: PMT0976
Alternate gene names: NA
Gene position: 1053325-1053654 (Clockwise)
Preceding gene: 33863244
Following gene: 33863253
Centisome position: 43.69
GC content: 48.18
Gene sequence:
>330_bases ATGGGCTTTCAAGGTGCCCTGCAAAGAGTCGGCAGACTGAACCAAGCAGGAATTGATGCCTTTCTGCCCATTGCCGTTGG TGAGAACAGCGTCTTTTTTATCGATGCCTTAGTAAACGCCAATTTCTCTTTCTACGACAACTACTCAAGCATAATTAATA CTGTACCGATGAAGCTGCGTTGCTTCGGCAAAAAAGAAGGAACTCTGATGCTACCTGGCTTCTACAAAGGCGTAAGCGGG ATGGGATTAGAGCTGCTCGAGGATGATCAATCACGAGCTGTCGTATCTCAACTGATCAGCGCTGGACCCTGGGCTGTGCT CAATGACTAG
Upstream 100 bases:
>100_bases CAATGAGCAGCTCGAGGCCCAGATCAGCAGCTCTTCTCTAGACAATGATGATACCTTTGATCTGCTGGAGATCAACCTCA AGGATGCTGCTCAGTTCAAC
Downstream 100 bases:
>100_bases CCAACATGCTGGCCAGATAGCCATGGCTTTTAAGCTCATCCCACTTGCCTGACATGACTTCTTTAGGTTGATTTCTCTCC AATATTACGATCTGGTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: MrsD-Like Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MGFQGALQRVGRLNQAGIDAFLPIAVGENSVFFIDALVNANFSFYDNYSSIINTVPMKLRCFGKKEGTLMLPGFYKGVSG MGLELLEDDQSRAVVSQLISAGPWAVLND
Sequences:
>Translated_109_residues MGFQGALQRVGRLNQAGIDAFLPIAVGENSVFFIDALVNANFSFYDNYSSIINTVPMKLRCFGKKEGTLMLPGFYKGVSG MGLELLEDDQSRAVVSQLISAGPWAVLND >Mature_108_residues GFQGALQRVGRLNQAGIDAFLPIAVGENSVFFIDALVNANFSFYDNYSSIINTVPMKLRCFGKKEGTLMLPGFYKGVSGM GLELLEDDQSRAVVSQLISAGPWAVLND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11824; Mature: 11693
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFQGALQRVGRLNQAGIDAFLPIAVGENSVFFIDALVNANFSFYDNYSSIINTVPMKLR CCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCHHHHHHCCCCEEE CFGKKEGTLMLPGFYKGVSGMGLELLEDDQSRAVVSQLISAGPWAVLND EECCCCCCEECCHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEECC >Mature Secondary Structure GFQGALQRVGRLNQAGIDAFLPIAVGENSVFFIDALVNANFSFYDNYSSIINTVPMKLR CHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCHHHHHHCCCCEEE CFGKKEGTLMLPGFYKGVSGMGLELLEDDQSRAVVSQLISAGPWAVLND EECCCCCCEECCHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA