| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863242
Identifier: 33863242
GI number: 33863242
Start: 1049007
End: 1049402
Strand: Direct
Name: 33863242
Synonym: PMT0971
Alternate gene names: NA
Gene position: 1049007-1049402 (Clockwise)
Preceding gene: 33863235
Following gene: 33863243
Centisome position: 43.51
GC content: 50.76
Gene sequence:
>396_bases ATGGATTTTGATTCGCAAAAACCGTACACGAGCCGTTCAGGTGGTGATGTCTATCGCCGACCGGCCCTGGTTCTTACGAC CTTTTTGGTTCGGTCGGAAATTCTGATGGCGTCATGCTGTAGGGGTCTTGAACTGAACGACATGTATTCACGATTCGATG AAGTCTTCAATGGTCCCTTTGGCTACACCATTCCTCGTGATCGCGTTGTTGTGATCCCTGATTCTGCGTACAAGGCTGCT CAGGAGCGTCAAAACGCACAGCGCGTTGCTCGTCTTGAAGCACGCAGAGCAGAGTATCTTTCAGTTGTTGATCAGCTCGA GAAGCAGATTGCCGAATTGCAGCCTTCTCAGCAAGAACCAGTGCCAGACAAAGGGTTGGCGGCAGCTAAAACCTGA
Upstream 100 bases:
>100_bases CTATGTCATCAACAAGATCACAGGAGAGAAGCGTTTGCTTTGAAACCTTGCGCAAGCAAAGAAGCTCTGGGGTTCCCTCA AAGATGCGATGGATTGATCG
Downstream 100 bases:
>100_bases CCGCTAGCACCTATGGGTGTGGGAGAGAAAAGACCTCCTGGTTCCTCGGGGGTCTTTTGTTCCTAAGGCAATCTTTAACT GCAGCGTGATGGTGCACACC
Product: bZIP transcription factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MDFDSQKPYTSRSGGDVYRRPALVLTTFLVRSEILMASCCRGLELNDMYSRFDEVFNGPFGYTIPRDRVVVIPDSAYKAA QERQNAQRVARLEARRAEYLSVVDQLEKQIAELQPSQQEPVPDKGLAAAKT
Sequences:
>Translated_131_residues MDFDSQKPYTSRSGGDVYRRPALVLTTFLVRSEILMASCCRGLELNDMYSRFDEVFNGPFGYTIPRDRVVVIPDSAYKAA QERQNAQRVARLEARRAEYLSVVDQLEKQIAELQPSQQEPVPDKGLAAAKT >Mature_131_residues MDFDSQKPYTSRSGGDVYRRPALVLTTFLVRSEILMASCCRGLELNDMYSRFDEVFNGPFGYTIPRDRVVVIPDSAYKAA QERQNAQRVARLEARRAEYLSVVDQLEKQIAELQPSQQEPVPDKGLAAAKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14818; Mature: 14818
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFDSQKPYTSRSGGDVYRRPALVLTTFLVRSEILMASCCRGLELNDMYSRFDEVFNGPF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC GYTIPRDRVVVIPDSAYKAAQERQNAQRVARLEARRAEYLSVVDQLEKQIAELQPSQQEP CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPDKGLAAAKT CCCCCCCCCCC >Mature Secondary Structure MDFDSQKPYTSRSGGDVYRRPALVLTTFLVRSEILMASCCRGLELNDMYSRFDEVFNGPF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC GYTIPRDRVVVIPDSAYKAAQERQNAQRVARLEARRAEYLSVVDQLEKQIAELQPSQQEP CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPDKGLAAAKT CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA