| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863231
Identifier: 33863231
GI number: 33863231
Start: 1040973
End: 1041452
Strand: Reverse
Name: 33863231
Synonym: PMT0960
Alternate gene names: NA
Gene position: 1041452-1040973 (Counterclockwise)
Preceding gene: 33863232
Following gene: 33863229
Centisome position: 43.2
GC content: 51.04
Gene sequence:
>480_bases ATGTTCGAGCAATTGATGGCAAAAGTGAGAGCAAAGCGCTTACTGCCGACTGGCTGCAGTTTTCACATCACACTGCGCTG CAATAGCCGGCAGTTCTTGATTGCCAAAGCCCTTAGGCGTGATGTGTTGTTGGCGGTACTTCAAAAGACCAAGCAGAAGT TTGCGGTGAAGGTTTATGGGCTCTGCCTGATGACTAACCATCTTCACTTGCTGGTTAAGCCAGAAGAAGCCAAGGATTTG CCGAGGCTGATGCACTGGTTCGCCTGGTACTCCGCCATGGCCCTAAACCGCTTGTGCGGGCGTTGCGCGCACTTCTGGGA GGCCAGGTATTTCTCAACGCCAATCCACCCCAAAGACCACAGAAGAGAGTTGAACACCTTGAGGTCTATCCATGCCAATC TCAAAGTGGCTGTTGTAAGAAAAGGCTTTGATGACCCCTATTCCAACTATGGCCACTACAGCCGGTTAAAAGCAGACTGA
Upstream 100 bases:
>100_bases CCAAGTCTCAATCGCGTTACGGATCTTGGTGTGAAGCTGTCTGTGCTCTCAGGCGACGCAAGATTTAGCGATAAGTGAAA TAACAGCTCTGAGGCTGTAG
Downstream 100 bases:
>100_bases ATCAGTGAATGGAGCCTTGCCTTTTTAAAGCTCTCGGCAACGCTTGATGGATCAAGAGTATTTCATAAGGATTAGATGGT AGGAATATGTCAACAGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD
Sequences:
>Translated_159_residues MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD >Mature_159_residues MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18666; Mature: 18666
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYG CHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLMTNHLHLLVKPEEAKDLPRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDH HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYG CHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLMTNHLHLLVKPEEAKDLPRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDH HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA