Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863231

Identifier: 33863231

GI number: 33863231

Start: 1040973

End: 1041452

Strand: Reverse

Name: 33863231

Synonym: PMT0960

Alternate gene names: NA

Gene position: 1041452-1040973 (Counterclockwise)

Preceding gene: 33863232

Following gene: 33863229

Centisome position: 43.2

GC content: 51.04

Gene sequence:

>480_bases
ATGTTCGAGCAATTGATGGCAAAAGTGAGAGCAAAGCGCTTACTGCCGACTGGCTGCAGTTTTCACATCACACTGCGCTG
CAATAGCCGGCAGTTCTTGATTGCCAAAGCCCTTAGGCGTGATGTGTTGTTGGCGGTACTTCAAAAGACCAAGCAGAAGT
TTGCGGTGAAGGTTTATGGGCTCTGCCTGATGACTAACCATCTTCACTTGCTGGTTAAGCCAGAAGAAGCCAAGGATTTG
CCGAGGCTGATGCACTGGTTCGCCTGGTACTCCGCCATGGCCCTAAACCGCTTGTGCGGGCGTTGCGCGCACTTCTGGGA
GGCCAGGTATTTCTCAACGCCAATCCACCCCAAAGACCACAGAAGAGAGTTGAACACCTTGAGGTCTATCCATGCCAATC
TCAAAGTGGCTGTTGTAAGAAAAGGCTTTGATGACCCCTATTCCAACTATGGCCACTACAGCCGGTTAAAAGCAGACTGA

Upstream 100 bases:

>100_bases
CCAAGTCTCAATCGCGTTACGGATCTTGGTGTGAAGCTGTCTGTGCTCTCAGGCGACGCAAGATTTAGCGATAAGTGAAA
TAACAGCTCTGAGGCTGTAG

Downstream 100 bases:

>100_bases
ATCAGTGAATGGAGCCTTGCCTTTTTAAAGCTCTCGGCAACGCTTGATGGATCAAGAGTATTTCATAAGGATTAGATGGT
AGGAATATGTCAACAGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL
PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD

Sequences:

>Translated_159_residues
MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL
PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD
>Mature_159_residues
MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYGLCLMTNHLHLLVKPEEAKDL
PRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDHRRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18666; Mature: 18666

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYG
CHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLMTNHLHLLVKPEEAKDLPRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDH
HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MFEQLMAKVRAKRLLPTGCSFHITLRCNSRQFLIAKALRRDVLLAVLQKTKQKFAVKVYG
CHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLMTNHLHLLVKPEEAKDLPRLMHWFAWYSAMALNRLCGRCAHFWEARYFSTPIHPKDH
HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RRELNTLRSIHANLKVAVVRKGFDDPYSNYGHYSRLKAD
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA