| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863203
Identifier: 33863203
GI number: 33863203
Start: 1014938
End: 1015489
Strand: Direct
Name: 33863203
Synonym: PMT0931
Alternate gene names: NA
Gene position: 1014938-1015489 (Clockwise)
Preceding gene: 33863193
Following gene: 33863204
Centisome position: 42.1
GC content: 53.44
Gene sequence:
>552_bases GTGAGGACAGCATGCTCAGTTGGTCACTTCACTGATGGCTTTGGCAATGCCATTGCTAGCGTTTGCCGTCCTTTGCGCAT TGTTTACTTGGGTCATCGCAAAGCTCGCGCGACCCTTGAGCAACTCGTCGACAAGCATTTAATCGATAAGCGCAACGTCA ATGATCCACGAGCTGGCGGCACTGTTATTCGCTACCGGCCCATTTGCTCTGATCTCAGCCTCGCGCGCGTGGGTATCCAA AAACACCCTCCCCAGCCTCCCCAGGGTCCGGAGGTTGCTAATGCAAGTCTGCGAGTTATTCATTCTCCTTTGTCTCCTTT GCTCAATGCAAAAGAGGCTGAGGAGGCTGAGGAGCCGCAAAACAAAGCCCCGCGCGCGCGAGGTAATGCCTCTTCTCTCC TCGGGCTGCATGAAGACATCTTCTGGGAGATCGTCGACAAAAACCCCGACGCCTTGCCGAATCCAATCGCTAACAAGTTC ATGGTTGCTACTGGTCGAATCCTCGAGGGTCGGAGGGTTCTCGAATTAATCAAAAACCGACCCTTGAACTAA
Upstream 100 bases:
>100_bases TGATTCTTTTCACTATCTTTGAGCGGCTTTAATCATCCAAAAGCATCTTGCCGATGGGCAATTAGATGTACACATTTGCT TAAGTATTTATTTTTGACTT
Downstream 100 bases:
>100_bases TTCCTGTCAGAATCCAAAGCATGGGTAAGAAATGCACCAAGTACGAAAAAGAAAAACGCGTCCTGCAATTCGTACAGATG CTCTCTAAAGGTGCTGTCAA
Product: SecA protein, amino terminal region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF MVATGRILEGRRVLELIKNRPLN
Sequences:
>Translated_183_residues MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF MVATGRILEGRRVLELIKNRPLN >Mature_183_residues MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF MVATGRILEGRRVLELIKNRPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20179; Mature: 20179
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TVIRYRPICSDLSLARVGIQKHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQ EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCH NKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKFMVATGRILEGRRVLELIKNR HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC PLN CCC >Mature Secondary Structure MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TVIRYRPICSDLSLARVGIQKHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQ EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCH NKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKFMVATGRILEGRRVLELIKNR HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC PLN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA