Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863203

Identifier: 33863203

GI number: 33863203

Start: 1014938

End: 1015489

Strand: Direct

Name: 33863203

Synonym: PMT0931

Alternate gene names: NA

Gene position: 1014938-1015489 (Clockwise)

Preceding gene: 33863193

Following gene: 33863204

Centisome position: 42.1

GC content: 53.44

Gene sequence:

>552_bases
GTGAGGACAGCATGCTCAGTTGGTCACTTCACTGATGGCTTTGGCAATGCCATTGCTAGCGTTTGCCGTCCTTTGCGCAT
TGTTTACTTGGGTCATCGCAAAGCTCGCGCGACCCTTGAGCAACTCGTCGACAAGCATTTAATCGATAAGCGCAACGTCA
ATGATCCACGAGCTGGCGGCACTGTTATTCGCTACCGGCCCATTTGCTCTGATCTCAGCCTCGCGCGCGTGGGTATCCAA
AAACACCCTCCCCAGCCTCCCCAGGGTCCGGAGGTTGCTAATGCAAGTCTGCGAGTTATTCATTCTCCTTTGTCTCCTTT
GCTCAATGCAAAAGAGGCTGAGGAGGCTGAGGAGCCGCAAAACAAAGCCCCGCGCGCGCGAGGTAATGCCTCTTCTCTCC
TCGGGCTGCATGAAGACATCTTCTGGGAGATCGTCGACAAAAACCCCGACGCCTTGCCGAATCCAATCGCTAACAAGTTC
ATGGTTGCTACTGGTCGAATCCTCGAGGGTCGGAGGGTTCTCGAATTAATCAAAAACCGACCCTTGAACTAA

Upstream 100 bases:

>100_bases
TGATTCTTTTCACTATCTTTGAGCGGCTTTAATCATCCAAAAGCATCTTGCCGATGGGCAATTAGATGTACACATTTGCT
TAAGTATTTATTTTTGACTT

Downstream 100 bases:

>100_bases
TTCCTGTCAGAATCCAAAGCATGGGTAAGAAATGCACCAAGTACGAAAAAGAAAAACGCGTCCTGCAATTCGTACAGATG
CTCTCTAAAGGTGCTGTCAA

Product: SecA protein, amino terminal region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ
KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF
MVATGRILEGRRVLELIKNRPLN

Sequences:

>Translated_183_residues
MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ
KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF
MVATGRILEGRRVLELIKNRPLN
>Mature_183_residues
MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGGTVIRYRPICSDLSLARVGIQ
KHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQNKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKF
MVATGRILEGRRVLELIKNRPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20179; Mature: 20179

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TVIRYRPICSDLSLARVGIQKHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQ
EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCH
NKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKFMVATGRILEGRRVLELIKNR
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PLN
CCC
>Mature Secondary Structure
MRTACSVGHFTDGFGNAIASVCRPLRIVYLGHRKARATLEQLVDKHLIDKRNVNDPRAGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TVIRYRPICSDLSLARVGIQKHPPQPPQGPEVANASLRVIHSPLSPLLNAKEAEEAEEPQ
EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCH
NKAPRARGNASSLLGLHEDIFWEIVDKNPDALPNPIANKFMVATGRILEGRRVLELIKNR
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PLN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA