| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863160
Identifier: 33863160
GI number: 33863160
Start: 970796
End: 971086
Strand: Reverse
Name: 33863160
Synonym: PMT0888
Alternate gene names: NA
Gene position: 971086-970796 (Counterclockwise)
Preceding gene: 33863161
Following gene: 33863158
Centisome position: 40.28
GC content: 40.21
Gene sequence:
>291_bases ATGGGCATTGATCAACTCATAACTCCTAACACCTTCGGCTTTATAGCTGCTGCATTAACGACCATTGCATTCATACCTCA GGTCATAAAGACATGGAAAAGCAAGAAGGCTGATGATGTATCAATAGTGATGCTCTTGATGTTTATCACTGGTCTCTTGT TTTGGATTATCTATGCAATAGAAACGAATGCTTTTCCTGTTCTTATTGCAAATATCATTACCTTCACACTCAACGTGACA ATCCTTATCCTTAAGTTGATCTATGGGAAGCGACCCACTACGGCAGGCTGA
Upstream 100 bases:
>100_bases CTCCCAAAAGCTACTGGGGTATGCCTCTCTAGATAGACAAAGCTGCTGTGCAATTACACTGAGAGAACCATTCTCTAGAA ACTAATTCTTAGAGTTCTAA
Downstream 100 bases:
>100_bases AATAACATAGTATCACGGAATGGAGTCCTGCCTTTTTAAAGCTCTCGGCAACGCTTGATGGGTGCGCCAGGAGCTATGAG CATTTCTGCCAGCTTTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MGIDQLITPNTFGFIAAALTTIAFIPQVIKTWKSKKADDVSIVMLLMFITGLLFWIIYAIETNAFPVLIANIITFTLNVT ILILKLIYGKRPTTAG
Sequences:
>Translated_96_residues MGIDQLITPNTFGFIAAALTTIAFIPQVIKTWKSKKADDVSIVMLLMFITGLLFWIIYAIETNAFPVLIANIITFTLNVT ILILKLIYGKRPTTAG >Mature_95_residues GIDQLITPNTFGFIAAALTTIAFIPQVIKTWKSKKADDVSIVMLLMFITGLLFWIIYAIETNAFPVLIANIITFTLNVTI LILKLIYGKRPTTAG
Specific function: Unknown
COG id: COG4095
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10618; Mature: 10487
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDQLITPNTFGFIAAALTTIAFIPQVIKTWKSKKADDVSIVMLLMFITGLLFWIIYAI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ETNAFPVLIANIITFTLNVTILILKLIYGKRPTTAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GIDQLITPNTFGFIAAALTTIAFIPQVIKTWKSKKADDVSIVMLLMFITGLLFWIIYAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ETNAFPVLIANIITFTLNVTILILKLIYGKRPTTAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA